Gene Bphy_4297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4297 
Symbol 
ID6245821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1308793 
End bp1309833 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content64% 
IMG OID642596053 
Productpyridoxal 4-dehydrogenase 
Protein accessionYP_001860460 
Protein GI186473118 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.962411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATG CGGCAGTTTC AAACGTGAGC AAGCGGCGCA AGATCGGACG GCGCTCGCTC 
GAAGTCACGG GCCTCGGTTT GGGCACTGCG CCGCTCGGCG GACTCTACCG CGATCTCGCC
GACGAAGAAG CATTCGGCGC CGTTCAGGCC GCGTGGGACG CGGGCGTGCG TTACTTCGAT
ACCGCGCCGC ACTACGGCCA TACGAAAGCC GAGCATCGTC TGGGCGATGC GCTGCGGCGC
TATCCGCGCC ATGAGTTCGT GCTGTCGACC AAGGTCGGAC GCCACTATGT GCCGCGCAAG
CATCCGTACG ACGGCAGCGA AGGCTGGCAA AATCCGCTGC CCTTCGAAGC AATCTACGAC
TATACGCACG ACGGCATTCT GCGTTCGTTC GAAGACAGCC AGCAGCGCAT GGGTATCGTC
GATATCGACA TCCTGCTGGT GCACGACATC GGCGTGGCGA CGCACGGCGA GCGCAACGCG
CATTACTGTC AGCAACTGAC GCACGGCGGC GGCTTTCGCG CGCTCGACGA TCTGCGCTCG
CAAGGCGCCG TGCAGGCAGT CGGTCTCGGC GTCAACGAAG GCGCGGCGAT CCTCGATGCG
ATACGCGACT TCGACATCGA TTGCGCGCTG CTCGCCGGCC GCTACACGCT GCTCGAACAG
GCCACGCTCG CCGATCTGCT GCCCGAATGC GAAAAGCGCA ATGTCAGTAT TCTGCTGGGC
GGCGCGTTCA ATTCGGGGAT TCTCGCGCTC GGCGTCGAAG GCGATCTGAA GTTCAACTAT
GGCGAAGCGC CGAAGGAAAT CATAGAACGC GTCGCGCGTC TCGAAGCCGT GTGCAAGGAG
CATGGCGTGC CGCTTGCCGC CGCGGCGCTG CAGTTTCCGT ATGCGCATCC CGCTGTCGCC
ACGGTGTTGA CGGGCGCGCG CAATGCGGCT GAACTGCGCG AGAATGTGGC TTCATTCGAC
AAGCCCATTC CCGCTGAACT CTGGCAGGCG CTGCGCGATA AAGGATTGCT CGATTCGCGC
GCGCCCGTGC CGGCAGCCTA G
 
Protein sequence
MTDAAVSNVS KRRKIGRRSL EVTGLGLGTA PLGGLYRDLA DEEAFGAVQA AWDAGVRYFD 
TAPHYGHTKA EHRLGDALRR YPRHEFVLST KVGRHYVPRK HPYDGSEGWQ NPLPFEAIYD
YTHDGILRSF EDSQQRMGIV DIDILLVHDI GVATHGERNA HYCQQLTHGG GFRALDDLRS
QGAVQAVGLG VNEGAAILDA IRDFDIDCAL LAGRYTLLEQ ATLADLLPEC EKRNVSILLG
GAFNSGILAL GVEGDLKFNY GEAPKEIIER VARLEAVCKE HGVPLAAAAL QFPYAHPAVA
TVLTGARNAA ELRENVASFD KPIPAELWQA LRDKGLLDSR APVPAA