Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4228 |
Symbol | |
ID | 6245755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 1220795 |
End bp | 1221745 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642595987 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_001860394 |
Protein GI | 186473052 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.679843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCC ATCGTCCGCA ATCCACCGCC GCCGAACCCG CCATCGCCGC GCGCATCACG GCCGCGATGC CGATTCTCAC GCCTGTTCAT CGGCGCATGG GCGAGTTCGT GCTGGCCAAC CAGTTCCGTG CGGCCACCAT GCGCATCGAC GAACTCGCGA CGGCCGTCGG CGCATCCATC GCAACGGCGA ACCGCTTCGC ACGCGCGCTC GGCTTCGACG GCTACCCCGC GTTTCGAGAA GCGCTCGTAC GCGGCTTCGA AGCGACGCTT GCGCCCGTCG AACGTCTGCG TTCCGCACAG GAGTCCCGGA CGAATGGCGA CGAACTGTTC AGCGCATCGC TCGAACAGGC CGCCACCAAT CTCGGCACCA CACGCAGCGC AATCGACGGC ACCGCGGCCG AAGCCGTCGT CGAAGCGATC ATCGCGGCGC GGCGCGTTTT CATCATCGGA AGCGGCGCGA GTGCGTTTCT CGCCAGCCTG ATGGAGCACA ACCTGCTGCC GTATCACGAC AATGTGCAAT CGCTCGCGCT GATCGGCGGT CCAACGCATG CGGCGCGCCG TCTGTTCAAC GCAGGCAAAG GCGATCTCGT GATCGCCATC GCGTTCCCGC GCTATGTCGA CGACACCATC GAACTCGCTC GCCGCGCCGC CAGTCTCGGC GCAGACGTAC TCGCGCTGAC GGACGGCCCG GCGTCGCCGC TCGCGGCGCT GGCCACGCGC TCGCTCTTCA TTCGCGCGGA ACGCCGTCTC GCTGCGACAT CGGAGGCGAC CGTGCTAGCG GTGATCGAAG CATTGTGCGA CGCCGTTGCG TTCCGCGCGA AGCGTTCGGC CCAGGCGGCC GCCAATATGA CCGAGTTCGT GTTGCCGTGG CTCACTGATA CAGCGTCGCT GCAGACCCAA TCGAAGACCG CCACGCGGCC CACTCCTCAC CAGGCAAAGA AAAAGCAATG A
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Protein sequence | MSRHRPQSTA AEPAIAARIT AAMPILTPVH RRMGEFVLAN QFRAATMRID ELATAVGASI ATANRFARAL GFDGYPAFRE ALVRGFEATL APVERLRSAQ ESRTNGDELF SASLEQAATN LGTTRSAIDG TAAEAVVEAI IAARRVFIIG SGASAFLASL MEHNLLPYHD NVQSLALIGG PTHAARRLFN AGKGDLVIAI AFPRYVDDTI ELARRAASLG ADVLALTDGP ASPLAALATR SLFIRAERRL AATSEATVLA VIEALCDAVA FRAKRSAQAA ANMTEFVLPW LTDTASLQTQ SKTATRPTPH QAKKKQ
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