| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3359 |
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| Symbol | |
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| ID | 6244789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 296356 |
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| End bp | 297456 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642595148 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001859560 |
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| Protein GI | 186472218 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.767293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000000000800909 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCAAGA CAATACTGAC GGGATTGACG GGAGTGCTGA GCTTATTGAT CGCGTCGCTG
GCCGTGGCAG CGGGAGTCAG CGCGCACTAC AAGATCGTGA CGGGGCAGGA GCGCGGAACC
TACATCCAGA TCGGCGCGGA CCTCGCGAAA TACGTCGCGC AGCCGGCCGG CATCGACCTC
GAAGTGATGC CTTCGAAGGG TTCCGCAGAG AACGTGCAGC GCATGCGCTT CGAGCCGGGC
GTGAAGCTCG CGCTTGTGCA ATCGGATGTG TACCAGGCGT ATCTCGACAT GGCGAATTCG
GGCAACGCCG ACGCGGGAAC GACAATCCGC CCGCTGCGGC TCATCATGCC GCTCTACAAC
GAAGAGATCT ATTTCGTCGT GCGCAACGAC TCGCCGATGA CGACGATCAA CGAGATCAAG
GACAAGGTCA TCAGCATCGG GCCGATCGGC AGCGGCACCG CGCAGTCGGC AACCACGCTC
TACCGCCTGA TGTTCAATCA GGCGATTCCC GAGCAGAACG TGCAGAGCCT GTCGAACGAA
GACGCGATTG CCGCGCTCGT CGTGAAGAAG ATCGACGTGG CCGTGATCGT TGCGGGTCAG
CCGGCCAAGC TCTTCACCGA CATGAATCCC GACCTGCTCT CGCAGATCCG CATTCTGCGC
GTCGACCCGG GTGCGGCGGA AACGACGCGT GCGAAGGAAA CCTATTTTCC CGCGACGATC
CGCCAGAGCA GCTATCCGAA CTGGCTGAAA GAAGACGTGC CGACGCTGAC CGTGAAGGCC
TTTCTCGTCA CATACGATTA CGGTCTGCGC GATACCGTGA GCAATCTGAA CCGCTTCGCC
GATTCGCTGT GCGAGAACTT CGATGTCCTT CAGGAGAAAG GTCATCCGAA GTGGAAACAG
GTAAAACTCG AACTGCCGCC ACTCACGAAA GGCTGGCAAT ACTATCCGCC GATCGAACGG
CACCTGCGTT CGTGCATCGC GCGGCGCGCG TCGATGCCGG CAGGCGGTAC GTCGGCGTCG
GTGCAACAGC AGCCGGCCGC GCCGAAGACG AAACGGCCTT GCTCCGATCA GGAGCGTCTG
CTTCTGTTGT GCGGCAAGTA A
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| Protein sequence | MLKTILTGLT GVLSLLIASL AVAAGVSAHY KIVTGQERGT YIQIGADLAK YVAQPAGIDL
EVMPSKGSAE NVQRMRFEPG VKLALVQSDV YQAYLDMANS GNADAGTTIR PLRLIMPLYN
EEIYFVVRND SPMTTINEIK DKVISIGPIG SGTAQSATTL YRLMFNQAIP EQNVQSLSNE
DAIAALVVKK IDVAVIVAGQ PAKLFTDMNP DLLSQIRILR VDPGAAETTR AKETYFPATI
RQSSYPNWLK EDVPTLTVKA FLVTYDYGLR DTVSNLNRFA DSLCENFDVL QEKGHPKWKQ
VKLELPPLTK GWQYYPPIER HLRSCIARRA SMPAGGTSAS VQQQPAAPKT KRPCSDQERL
LLLCGK
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