Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2993 |
Symbol | |
ID | 6244474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 3351893 |
End bp | 3354262 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642594796 |
Product | TPR repeat-containing protein |
Protein accession | YP_001859209 |
Protein GI | 186477739 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00312978 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACGACA TTCCGACCCT TCTGAACGCC GCGCTGACGC ATCATCAGGC AGGGCGCCTC GCCGACGCGC AGGCGCTCTA CGACGCCATT CTGCAGACCG AGCCGGCGCA ATCCGACGCG CTGCATTTCT CCGGCTTGCT CGCGTGCCAG ACGGATCGCG CGGACGCGGG CATCGCGTTG ATGCGCGCAT CGATTGCGGC GAATCCGAAT GCCGTCTACT ACAACAATCT GGGCAACGTG CTGCTCGGAC GTCGTCAGCT TGGCGAAGCG ATCGAAGGCT ATCGGCAGGC GGTGAATCTG CGTCCCGATT ACGCCGAGGC GCACAACAAT CTCGGCAATG CACTGCGGGA AGCAGGCGAC GCCAACGCCG CGATGATGAG TTGCGCCACG GCGATCGAAC TGCGGCCAGG TTACGCGGAG GCGTACAACA ACCTCGGCAA TGCACTGAAG GATCTCGGCG ATCTCGGCAA CGCGGTGCTG GCGTATCAGA AGGCCGTGTC GTTCCGTCCG GACTATGCGG ACGCGTTCGG CAATCTCGCA CGCGCCGAGG CCGGGCGTGG CGACGCGGAC GCATCGATTG CCGCGTTTCG CCGCGCGCTC GCGCTCGATC CGGATCGTGC CGACAGCTAC GACAGTCTCG CGAAGCTGCT GCACGCGCGC GGTGAAATCG ACGCCGCGAT CGACACGTTG CAACAGGCGA CGCGACGCGA TCCCGCCGAT GCCGCGCGTC ATCGCTTGCT CGCGCAATGG CTGCTTGGCC GCCAGCGCTG GGACGAAGCG GCGCACGCGC TGACGAGCGC GGTCGAACTC GCGCCCAACG ACGCTGCGGG TTATGTGGAA CTGGGCGACG CGTATCAGCA CGCAGACAAG CTCGACGCCG CGATCCTTTG CTATCGGACG GCCACCGAAC TGGCACCCCG CGATGCGCCT GCGCACCATC GGCTCGCCGT TGCGCTCCTC AAACAGCGCC GCGCAGACGA AGCGCTCGAG AGCGCGCAAA AGGCCGTTTC GCTCGAACCG CATTCGGCCG TACCGCACGT GAATCTCGGC GACGTGCTGA GCGTGCTCGG CGACGCGGAC GGCGCAATTG CGAGCTATCG GCGCGGCATC GCGCTCGACG GCGAAATGGA ACTCGCGCAC AACCGCCTGC TGTTCGATCT CGCGACGCAC GCGCCGACGC CGCCCGCCGT CACGCTCGTC GCCGCGCGTG AATTCGGCGC GCGCATGGCC GCGCGTGCGC GCCGCTGCGA GCATCCGGCG CCGCAAGACG ACGGCAGAAA GCTGCGCATC GGTTTCGTGT CCGGCGATCT GCAACTGCAT CCCGTGGGCA TTTTCATCGA ATCGGTGATG GAGCATTTCG CGGACGGGAG CTTCGATCTG ATCGCCTACT CGACGCGCGC AAGCGAAGAC GACATCACCG CCCGCCTGAA ACAGCGCTTT ACTGCGTGGC GCAGCCTCGT GAACGTGCGC GACGAACAGG CCGTGCAGAT GATTCGCGAC GATGGCATCG ACATACTCGT CGATCTGTCG GGCCATACCG TGCACAACCG CCTGCCCGTG TTCGCGTGGA AACCTGCGCC CGTGCAGGTC AGCTGGCTCG GCTATTTCGG CACGACGGGG TTGAACGAAA TCGACTACGT GCTCGGCGAT CCACATGTGC TGCCCGTCGC TGAAGAATCG CACTATGTGG AGAAGACCTG GCGTCTGCCC GACAGCTACC TGTGCTTCAC GCCGCCGAAC GTCGATGTGG CCGTCGGCCC GTTGCCGATG ACGCTCAGCG GCCATGTCAC GTTCGGCTAT TTCGGCAAGC TCGTGAAGAT CACGCCCAAC GTGATCGCCG CCTGGTCGCG TCTGTTGCGT GCGGTGCCGG GCGCGAAGCT GATGATGAAA TCGCACGAAC TCGGCGCCGC GCACGCCCGG CGTTCGGCGG CTGAACAATT CGCCGCGCAA GGCATCGACG CATTGCGCCT CATTCTCGAA GGCGGCTCGC CGCGTCACGA ATATCTCAAA GCATATAACC GTGTCGACAT CATGCTGAGC CCGTTTCCAT ATCCGGGCGG CACGACGACG GCGGAAGCGC TGTGGATGGG CACGCCCGTC GTTGCGCTTC AAGGCGATCG CTTCGTCACG CATATCTGCG AGAGCGTGCT GAACGCGGCA GGACTCGGCG AATGGATCGC ACGCGACGAA GACGAATACA TCGCACTCGC GAGCGCGTGG GCCGCGCAGC GGGAGCGCCT CGCCGTCCTG CGCGCGCGTT TGCGTGCGCA GACGCTGGCG TCGCCGCTGT GCGATGCACG GCGCTTCGCG ACCAATCTGA AAGCAGCATT CGAAGGCATG TGGGCGCAAT ACGTTTCGCG CGCTGCTTGA
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Protein sequence | MHDIPTLLNA ALTHHQAGRL ADAQALYDAI LQTEPAQSDA LHFSGLLACQ TDRADAGIAL MRASIAANPN AVYYNNLGNV LLGRRQLGEA IEGYRQAVNL RPDYAEAHNN LGNALREAGD ANAAMMSCAT AIELRPGYAE AYNNLGNALK DLGDLGNAVL AYQKAVSFRP DYADAFGNLA RAEAGRGDAD ASIAAFRRAL ALDPDRADSY DSLAKLLHAR GEIDAAIDTL QQATRRDPAD AARHRLLAQW LLGRQRWDEA AHALTSAVEL APNDAAGYVE LGDAYQHADK LDAAILCYRT ATELAPRDAP AHHRLAVALL KQRRADEALE SAQKAVSLEP HSAVPHVNLG DVLSVLGDAD GAIASYRRGI ALDGEMELAH NRLLFDLATH APTPPAVTLV AAREFGARMA ARARRCEHPA PQDDGRKLRI GFVSGDLQLH PVGIFIESVM EHFADGSFDL IAYSTRASED DITARLKQRF TAWRSLVNVR DEQAVQMIRD DGIDILVDLS GHTVHNRLPV FAWKPAPVQV SWLGYFGTTG LNEIDYVLGD PHVLPVAEES HYVEKTWRLP DSYLCFTPPN VDVAVGPLPM TLSGHVTFGY FGKLVKITPN VIAAWSRLLR AVPGAKLMMK SHELGAAHAR RSAAEQFAAQ GIDALRLILE GGSPRHEYLK AYNRVDIMLS PFPYPGGTTT AEALWMGTPV VALQGDRFVT HICESVLNAA GLGEWIARDE DEYIALASAW AAQRERLAVL RARLRAQTLA SPLCDARRFA TNLKAAFEGM WAQYVSRAA
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