Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2790 |
Symbol | |
ID | 6244273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 3142482 |
End bp | 3143204 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642594586 |
Product | OmpW family protein |
Protein accession | YP_001859008 |
Protein GI | 186477538 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.888162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTAC AACAGGCCTT GGGGGTCGCG GCACTTGCTT GCATAACAAC CACAGCGCAC GCGCAATCGG CCGGTAGCAT CTACTTCACA GCTGGGTGGT TCCATCTCGC CCCTCAGTCC AGTAGTCAGC CGTTAAGAGA GACGAACGTC AACGGCACGC CAGTCAACAT CACCTTGCCG AACACTGGCG CTACCGCCGG CGACGGCGAC ACCATCGGCT TTACGGCAGG CTATTTCTTC ACCGACCATA TCGCCACCCA GTTCGACGTC GGCATTCCGC CGCAATTCGA CCTGAAGGGC AGCGGTGCGT TTCAGCAATA CGGCAAGCTC GGCTCGGCAA AACAGTGGAG CCCAACGCTG CTGCTGAAGT ACTACTTCAA CCAGCCGCAG GCGAAGTTCC GCCCGTATCT CGGCATCGGC GTGAGCCGCG TCTGGTTCAC CGACGAGAAG ATTTCGAACG GCACATTCCA GAACAACGTA CTTCATGGTC CGACCACCGT CACGACGGAT AGTTCGTGGG AGCCCGTGTT TAATGCCGGC TTCACCTATG CCTTCACCGA TCACTGGTTC GCTGGCTTCT CAATCTCCTA CCTGCCGCTT TCCACGACGG CCAAACTGAA CACCACGGCG AATACGCCCA TCGGTCCCGT CAACGTGCAA TCGGAAACGA AGATTCGTCT GAACCCGATC GTCACGTATG TGAACCTCGG CTATCGCTTC TAA
|
Protein sequence | MKLQQALGVA ALACITTTAH AQSAGSIYFT AGWFHLAPQS SSQPLRETNV NGTPVNITLP NTGATAGDGD TIGFTAGYFF TDHIATQFDV GIPPQFDLKG SGAFQQYGKL GSAKQWSPTL LLKYYFNQPQ AKFRPYLGIG VSRVWFTDEK ISNGTFQNNV LHGPTTVTTD SSWEPVFNAG FTYAFTDHWF AGFSISYLPL STTAKLNTTA NTPIGPVNVQ SETKIRLNPI VTYVNLGYRF
|
| |