Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1885 |
Symbol | |
ID | 6243374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 2142519 |
End bp | 2143397 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642593673 |
Product | peptidase S49 |
Protein accession | YP_001858110 |
Protein GI | 186476640 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000000297327 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACCT ATCCGTTTGC AGCGGCGCGC GTGTTTGACG TGCCGCTGGC GATCCACCCC ACCAAGGGAC AGGTGATTGC GAAGGTGCTC GCCGGTCGAT TCGGAATTTC CGATGTCGAG TTCGCCGGCG AAGCGCCGGT TTTCGTGAAG CCGATGGCTT ACGACGAGTG GGACGACGGC CCGAGCGAGC AATACGAAGA GACGCCGTAT GACCTGACGC AGGGGGTTGC GGTCATCGAC GTGTCGGGCA CGCTCGTCCA GAAAAGCAGC AACCTTCGGC CGTATTCGGG GATGCTCGGT TACAACGCAA TCCGCCACAA CTTCCTTGCC GCGCTAGATG ACAAGAAAGT GAAGGCGATC GTGCTGTCGA TCGACTCGCC AGGCGGTGAA GTGGCTGGCT GCTTCGATTT AGCCGACCTG ATCTACGAAT CGCGCAGCGT CAAGCCAACG CTTGCGATCC TGAACGAGTC CGGGTACAGC GCTGCTTATG CGCTCGCAAG CGCATGCGAG CAGATCACGG TCCCGCGGAC AGGCGGCACG GGCAGTGTCG GAGTGATCTG CATGCACGTA GATCAGAGCA AGGCAATCGA CAAGGCTGGG CTGACCGTCA CGATCATCAA ATACGGTGAT CGCAAGGCCG ACGGCAATCA GTTCAACCCG CTCTCGAAAG AGGCGCTCGA CCGGTACCAG GCCGAAGTCG ATGAAATGGG CGAACTCTTC GTTCAGACGG TCGCTCGCAA TCGCAACCTT TCCGCCGACG TCGTTCGAAA GACGCAGGCA ACCACCTTTC TCGGTGCCGC TGGTGTCGAG ATCGGCTTCG CTGACGCCGT GATGGCGCCC GACGAAGCGT TTCGCTCCCT GCTCAAAGAG CTGGGCTGA
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Protein sequence | MKTYPFAAAR VFDVPLAIHP TKGQVIAKVL AGRFGISDVE FAGEAPVFVK PMAYDEWDDG PSEQYEETPY DLTQGVAVID VSGTLVQKSS NLRPYSGMLG YNAIRHNFLA ALDDKKVKAI VLSIDSPGGE VAGCFDLADL IYESRSVKPT LAILNESGYS AAYALASACE QITVPRTGGT GSVGVICMHV DQSKAIDKAG LTVTIIKYGD RKADGNQFNP LSKEALDRYQ AEVDEMGELF VQTVARNRNL SADVVRKTQA TTFLGAAGVE IGFADAVMAP DEAFRSLLKE LG
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