| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0578 |
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| Symbol | |
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| ID | 6242078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 655807 |
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| End bp | 657162 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642592341 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001856815 |
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| Protein GI | 186475345 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.605561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.183245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC ATCTTTTCTT CCACATGCTG GGCGACGTCG TGCGCGACTT CGGCCAGCCC
GTGATTCTCT GGCAGGTGGG CGTGCTGCTC GGCACGCTGG CGCTCGCCTG GCTGCTTGCG
CATCTCGCAC GGCACGCGCT CGATGCGCAG CGCGAGACCC GCTACGGCGC GCTGCGCTTC
GGCGCCGAAG CGCTCAATCG CGCGCTATTT CCGCTGCTCG GCGGCGTGCT GGTGTGGATC
GCGCGGGCGA TCGCCGGCCA GTTCATTCAC ACGTCGCTGC TCGATCTGGC GCTGGTGCCG
CTGTTTGGCA TCGGGCTCAT CTACATCGTG TTCTATCTCG CGCGGCGTGT GTTCGGGCGG
GATGGCAGCG CGCACACGTG GCTTTCGCTG GTCGAAAAGG TCGTGTCGCT GATCGTGTGG
ATCGGCATGG TGCTGACCGT GATGGGCATC CAGAACGACG TGCTCAAATG GATGGCGAGC
GTGCAGTTCC GCATCGCCAA CACGCATGTG ACGCTGCTGT CGCTGCTGTC GGGCTTGCTG
TGGGTGTGCG TGACGATGAT CGTCGCGATG TGGCTCGGCG CGGCCCTGGA AGACCGGCTG
ATGCGCTCGG GCTCGCTCGA CGCGAACCTG AAAGTGGTGC TGTCGCGCGT CGGTCGCGCG
CTGCTGATAC TTGGGGCCGT GCTGATCAGC CTGTCGCTGG TCGGTATCGA CATCACGGTG
CTCGGCGTGT TCGGCGGGGC GCTCGGCGTG GGCCTCGGTT TCGGCTTGCA GAAGATCGCG
AGCAACTACG TGTCGGGCTT CATCATCCTG ATCGACCGGT CGCTGCGCAT CGGCGACACG
ATCAACGTGA GCGGCCTGCA GGGCATGGTC ACGCAGATCC GCACGCGTTA TACCGTCGTG
CGCGGTCTGG ACGGGATCGA AACGCTGATT CCAAACGAAA AGCTGATTAC CGACGTCGTG
CAGAACCAGT CGTCGTATCT GACGCGCGGC AACGCGAAGG CGACGGTCCA GATCGCCTAT
TCGACGGACG TCGAACAGGC GATGGCGCTG CTGGTCGAGG CCACAGCGGG CGTCGCGCGC
GTGCTGCAGG AACCCGCGCC CACGCCTTAT CTGGCGGGCT TCGGCCCCGA CGGCATCAAT
CTCGAACTCG GTTACTGGAT CGAAGACGCG GCCACGGGTA CGTCCGGTGT GCGCTCGAAT
GTGAACCGCA ACATCTGGCG GCTCTTCAGC GAAAACGGCA TCGCGATTCC CTATGCTCAA
CGAGAAGTGC GAATTGTTGC GGGCGGGAGC GACATCATGC CGCAGGCGGT AAGCGTGACC
GGACAGACTG CCAACGACCC GGGCAGCGCC GCGTGA
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| Protein sequence | MQNHLFFHML GDVVRDFGQP VILWQVGVLL GTLALAWLLA HLARHALDAQ RETRYGALRF
GAEALNRALF PLLGGVLVWI ARAIAGQFIH TSLLDLALVP LFGIGLIYIV FYLARRVFGR
DGSAHTWLSL VEKVVSLIVW IGMVLTVMGI QNDVLKWMAS VQFRIANTHV TLLSLLSGLL
WVCVTMIVAM WLGAALEDRL MRSGSLDANL KVVLSRVGRA LLILGAVLIS LSLVGIDITV
LGVFGGALGV GLGFGLQKIA SNYVSGFIIL IDRSLRIGDT INVSGLQGMV TQIRTRYTVV
RGLDGIETLI PNEKLITDVV QNQSSYLTRG NAKATVQIAY STDVEQAMAL LVEATAGVAR
VLQEPAPTPY LAGFGPDGIN LELGYWIEDA ATGTSGVRSN VNRNIWRLFS ENGIAIPYAQ
REVRIVAGGS DIMPQAVSVT GQTANDPGSA A
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