| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0497 |
|---|
| Symbol | |
|---|
| ID | 6241998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 566315 |
|---|
| End bp | 567799 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642592261 |
|---|
| Product | xylulokinase |
|---|
| Protein accession | YP_001856735 |
|---|
| Protein GI | 186475265 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.71509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.01013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCTCG GCATCGACCT CGGCACGTCC GAAGTGAAAG TTCTGCTGCT CGCGTCCGAT
GGACGCGTGG TCGGCACGGC AGGTTCTCCG TTCACCGTTT CGCGGCCGCA TCAACGCTGG
TCGGAACAGA ATCCGTCCGA CTGGTGGCAA GGCACGCGCA CCGCGCTGTT CGCGCTGCGC
GAGCGCTTTG CGGAACAGTT CGCGCAGATT CGCGGTATCG GCCTGTCGGG ACAGATGCAC
GGCGCCGTCC TGCTCGATCA CGAAGACCGC GTGCTGCGTC CGGCAATTCT GTGGAACGAC
ATGCGCGCCG TCGAAGAATG CGACGAGCTG TATCGCCGCG CGCCGGACCT GCATCGGATC
GCCGGCAATC TGGCGATGCC CGGTTTCACT GCGCCGAAAC TGTTGTGGGT CGCGCGTCAT
GAGCCCGAGA TTTTCCGGCA GACGGCGTGC GTGCTGCTGC CGAAGGACTA CTTGCGCCTG
CAACTGACGG GCGACAAGGT CTCCGATCCG TCCGACGCCG CCGGCACGCT CTGGCTCGAT
GTCGCGCAGC GCGACTGGTC CGACACGCTG CTCGCAGCCT GTCACCTGAA CCGCTCGCAC
ATGCCGCGTC TCGCCGAAGG CAGCGCGCCA TCGGGCATGC TGCGCGCCGA ACTCGCACGC
GAACTCGGCT TGCGCGAACC CGTCGTGGTC GCGGCAGGCG GCGGCGACAA CGCAACGAGT
GCGATCGGCA TCGGCGCAAC GCAGCCGGGC GACGGCTTCG TGTCGCTCGG CACGTCGGGC
GTGCTGTGCG TGATCGGCGA CAGCTTCCGG CCGAATCCCG AATCCGCCGT GCACGCGTTC
TGTCACGCGA TCCCCGATCG CTGGCATCAG ATGAGCGTGG TGTTGTCGGC GGCGAGCTGC
CTGCGTTGGG TCTGCAAACT CACGTCGACC GACGAGCCGA CGCTGCTCGC GGAAGTCGAC
AAGCTGCCGG ACGAAACGCT CGTCACCGCA CCGCTCTTCC TGCCGTACCT CTCGGGCGAG
CGCACGCCGC ATAACGATCC GTACGCGCAA GGCGTGTTCT TCGGCATGAC GCACGCCACC
GACCGCGCGC TGCTGGGCTA CGCGGTCCTC GAAGGCGTGA CGCTCGCACT GACGGACGGC
CTCGACGCGT TGCGCGCCGC GGGCACGGAA GTGAACGCGC TGTCGCTGCT CGGCGGCGGC
GCCCGCAGCA ATTACTGGGC ACAACTGCTC GCCGATTCGC TGAATACGAC CACACGCAAG
CATGGCGGCG GCGAAACGGG CGCGGCACTC GGCGCGGCGC GTCTGGGCTG GCTCGCGGCC
GGCGGCGATC CCGCCAAGGT GCTGACCAAG CCGCCCATCG AAGCCGAATT CACGCCGAAT
CCGCAGCGGC ACGCGGTGCT GCGCGAGCGG CTCGCCAGCT ATCGCGCGTT GTATCGTCAT
GTGAAGCCGA TGTTCGCGCC CGCGCGAGAA GCGAACACCG CGTAA
|
|---|
| Protein sequence | MYLGIDLGTS EVKVLLLASD GRVVGTAGSP FTVSRPHQRW SEQNPSDWWQ GTRTALFALR
ERFAEQFAQI RGIGLSGQMH GAVLLDHEDR VLRPAILWND MRAVEECDEL YRRAPDLHRI
AGNLAMPGFT APKLLWVARH EPEIFRQTAC VLLPKDYLRL QLTGDKVSDP SDAAGTLWLD
VAQRDWSDTL LAACHLNRSH MPRLAEGSAP SGMLRAELAR ELGLREPVVV AAGGGDNATS
AIGIGATQPG DGFVSLGTSG VLCVIGDSFR PNPESAVHAF CHAIPDRWHQ MSVVLSAASC
LRWVCKLTST DEPTLLAEVD KLPDETLVTA PLFLPYLSGE RTPHNDPYAQ GVFFGMTHAT
DRALLGYAVL EGVTLALTDG LDALRAAGTE VNALSLLGGG ARSNYWAQLL ADSLNTTTRK
HGGGETGAAL GAARLGWLAA GGDPAKVLTK PPIEAEFTPN PQRHAVLRER LASYRALYRH
VKPMFAPARE ANTA
|
|---|
| |