| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0240 |
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| Symbol | |
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| ID | 6241742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 272643 |
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| End bp | 278936 |
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| Gene Length | 6294 bp |
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| Protein Length | 2097 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642592002 |
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| Product | helicase superfamily protein |
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| Protein accession | YP_001856479 |
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| Protein GI | 186475009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGCG AACTAAAAAA TCTTCATCGT GCGTTGAGCG CGTATATTGA AGCGACCTAC
CATATCTCAA ACCCGAGCCT TGTTGATCTC CGCCGCGCTA TTCTCGACGA GCAAGGCACG
ATCTCTCAGC AAGCTTATGT GGAGAGCACC CCGATTTACC AGGGGAGACG GAAGTTTGCG
GATCTCGCAA TACCGCATCA GGCCCGTGAC TTTCTGAGTC ATCTCGGCAC CGCAGAGGGA
GGCAGGCTGG TTTTTGACCC TCCCTATGAT CACCAGGCGG ACGCCCTTGA GATCATCGCT
GGCTCATCTG CTCGTAGTGT ATTGGCGACT ACCGGCACGG GGTCGGGCAA GACCGAAACG
TTTCTTTTGC CGATTTTGAT GAAGTTGGCA AACGAAGCCG CCAGCAAACC CGAACAATTC
GCCGAGCGTG CTGTTCGCTC GATCATCTTG TACCCCATGA ACGCGCTGGT AAATGACCAG
TTGGGGCGGC TCCGGAAACT CCTGGGAGCA CCGGCAGTAC GTCATTGGTT CACCGAGCAT
GCGGGCAGAC CCGCAAAGTT CGCCCGATAC ACGGGGCGCT CGCTCTACCC AGGCCAACGA
ACAGAAGAGC GCAATAAGCA ACGCCTGAAG AGTCTCAACT TCTATCGAGA CCTCGAACGC
GGGGCGCAAA CTGACGAAGC CATCGCGTCG CAAATACGCG AACTGCGCTC GCTCGGGCGC
TGGCCTGCTA AGCCTGGTGA TGATGGTCTC GAAAATGGCA TGACAGCATG GCTCGGTAGC
GGCAAACGCT GGGTCGGCCC CGACCAACGA TTCCAACGTG CAATCGAGCG CCCCGAGGAT
GCGGAACTCT TACTGCGGCA TGAGGTGCAA GATCAGGCGC CCGATCTTTT GATTACGAAC
TATTCGATGC TCGAGTACAT GCTCTTGAGA CCGATCGAGC GTCCAATCTT CGAACGCACC
AAGGCATACT TCGAGAGTCA TCCAGATGAG CGATTGCTTT TCGTCCTTGA CGAGGCACAC
CTCTATCGAG GCGCGAGCGG CACCGAAGTC GCGCTCCTTA TTCGCCGGCT CCGCAATAGG
CTCGGTCTGG CGCCCGACCG CATGCAGGTG ATAGCCACTA GCGCTTCCTT TGCCGATGGA
GAGGCTGCAC GGAACTTCAT CGGTGACCTG GTCGGCCGCG AAGCCGACAC GATAGAAGTT
CTTCGAGGAA AAAAGTTCGC CCGACGTCCG TCGGGGTCCG GCGATTTGCC TCTTGCAACT
GCACTCGCAG CATGCGACAT AAAGCGGCTC AAGGATGTCG ATTCTGCGCA CCGTATCGAT
GCCCTTCGAC CTCTCCTAAC CTTCCGGCGC GAGGTGCTCA CCGCGGAGCG ATTTGCCCTC
GCGTCTGCTG CATCAGACGT CAAAAGGATA ACTCTGAACG GCCTCGACGC GATGCTAAAT
CCCGTCGAGG AAACCGTCAC TGTACCTGCA CACGGTCAGA TCGAAACAAC ATCTTCCTTT
CTCTTAATCA ACGAGATCAC CGCTGTTGAC GGCATCAGTA TTGGACGCTC GGCAGACAAA
CCCGATCTGA TGGTAATAGA TGGTCAGCAA AAGGTCATTC GCGACGGCTT GCAGCGTGCA
GTCCACGCAG CCCTGAAGGA TCTCCCCATA GTCGGAAGGC TCGTGAACCT TACCAGCGGC
GCGGAAACGA GGGAAGACGA AACCACCTTG ACTCCTCGAT CTCCAATCGC GATCAATGAG
ATTGGCGCCT TGCTCTTCGA GCATGACATT CCTGCCAGTA TCCATGTCCC CGCGACAGAT
GCCCTGCTCG AACTCGCATC CTACGCAAAG GCAGAACCTG AAGGCCAACC CCTGCTCGCC
GCGCGAGTGC ATGCCTTCTT TCGTGGCCTT CCGGGCCTTT GGGGCTGCGC CGACGTCGCT
TGCTCAAAGT TGCCTGCCAA TATCCGACCC GGTCCTACTG GCATGCTCTA TCCGCAATCG
ACGCGGGAAT GTGGATGCCG CGCGCGCGTG TTTGAAGTCC ACACATGTCG CGATTGTGGG
GTCGCTTATT TCCAGGCCTA CGCACTCAAC CCCGCCCAGC CCGACTTTTT ATGGGCAGAA
GACGTCGGCG ACCTCGAGGA CGTTGATGGC GTCGTCCGTC CCGTGCAGAT CCTGCTGGAG
GATCCGGGCT TCGATGCCGA CAAATATTGC ACTACCGCTT TCCTCGATCC CTTGACCGGG
CGTGTCGGTA CGCAATCCAC AAGTGCTCGC CAAATCTGGC TCCCACGCCC AACAAAAAAT
GTGGAACCTG GGCATTTCGA GAAGTGCCCA CACTGCGAAG GAAACGGTTC GCAGGTCATG
AATCACCAGA CCAAAGGCGA TGAGCCATTT CAGGAACTGA TTAGCGTCCA ACTGCTGGAC
CAACCTGCGC GCCCTGAAGC CGTTTCACCG CTTAAAGGGC GTAAATCTTT AATATTTTCC
GATGGTCGTC AAGCGGCTTC CAGACTATCG GGAAAACTCA AAGACTTCTC TCTTCAGGAC
AGCATACGCC CCCTTCTCCT GTCCGGCCTG AAGATGCTCG AACAGCGTTT CGATGAACCC
ATCGCCCTCG GGTATGCCTA TCCAGCGATC CTGTATGCAT GCGCCAAGTT CGACGTGAAC
TTCCGTCTGC CTGGTTCCGA ACATGAGGAG TTCGCCCGCG ATCTGCGCAA GGTGCGCAAC
TTTGTCAAAG ATCATGGAGA TCTTGGCGAG TTTCGGGAAT TGGCCGCGAC GCTAAACAAG
ACGCGTGTAC AGTCCGTGCG TGCGCCACTC ACGCGTGTAT TGTCCAACCG GCACACCGGA
TTGTTGCCGC TTGCACTTGC TGCTCCGCAG GCACTTCTGA CCGAGAACCA GATTAAGCGC
CTCAATACGT TGGATGCACC TCCTGCCGGC GGAGGAACCG ACGAAGAGAA GCGTCGCGCG
CTGCTCGATC TATGGATCGC TCTGTCGCTG TCCACCGGGT CGGTCATGCT GGAGGGTACG
CCCAGCGAGT GGATCGATTC ACGAGAAGGT CCACAGATCA AGAGGAGCAG CGGCCGCCAG
ACCGGCTTAT TTGAAAAGCT CTTCGGGGCA AGGTGGCATC GCGCACAATT CAGTAAGAAT
GCAAAACCAG GAGCAAGTTG GATCGATTTC TTAACCGATA CATTTGCACA GAACGAAAAT
GCGGAAGGCT TCTTTGTGAA TGCCGCCAAG GTCCGGCTGC GACCGGAGCA GGAAGTCAGG
TGGCGTCGCT GCGGCCATTG CACGTTGGCG CAACCCGAGA ATCTGCTGAT GGGCGGGACC
TGCATCCAAT GCGGAAAACA AACCGCGCTA CTCGATCCGC GTAAAGACAC GGTTTTTCGT
ACTCGAAAGT ACCTCTATCG CAAACTGGTT GAACGGCTCG AGGCAGAAAA CGATCAAGGC
TATGTACCTT ATCCCTTCGT TGCCGAAGAA CACACGGCTC AACTGAACGA CGCAGGTCAA
GATCAGGCTT TCTCGCGGGC GGAGTGGTAC GAGTTGCGCT TCCAAGACCT CGACGTCCCG
GGTCCACGCG GTGAGCGTGC AGGTGCGGTA GATGTGCTAA GTTGTACGAC CACGATGGAG
GTGGGCATCG ATATCGGTAG TCTCACGGCT GTCGCTCTGC GCAACGTGCC TCCAGGACGC
GCTAACTATC AACAGCGAGC TGGTCGAGCC GGACGCCGAG GTTCCTCCCT TTCGACCGTA
GTGACGTTTG CCGGCTCCGA TAGCCACGAC CAGCGCTTTT TCGCGGCGCC CCAAGCGATG
GTCGGAGGGC CCGTTCCTGA TCCGGTTCTG AATCTCGACA ATCGAGAAAT CGTACAGCGC
CATGCATTCG CGCTAATGCT GTCGCTATTC CAGCAAGAAC GGATTGAAAT GCCAGAGGCA
GATGGTGACG CCCAAGCCTC AAACATCTTC GAGTCGCTTG GCAAACTATC AGAATTTCGC
CTTCCCGACC CTGATGGCTT TACGTTTTCA GGCCTGAAAG CGTGGCTGGC GACTAACGCC
GCATTCGTCG ACGCCGCTCT TCGCGACGTT ATTCCGCCAG AGGCAGTCGA AGAAGATCCT
GAGCTTTTCT TCTCGTCCTT GCCACAAGAA CTTTTGCGGG CACTCGACTC GGTAGGTGCA
GGCGAGAAGG CGGTCGATCT CGTCGCAGCG AGTCCCGTCA TAGCGGCGGA AGAAGGGCCG
GTCTTCGACT TTGGCATCGA CGACTATGGT GACGATGGCG ATATGGGTGG TGTTCCTTCG
GACAACACAG CCGAAAAAGC GCACCAGAAC GCGGACGCAA ACCCCGAAGC TCCATTGCAA
CCTCAGAATC TGCTGGACCG ACTTTTCGCC AAGGCAGTGC TGCCCCGCTA TGCGTTCCCG
ACGGATGTCG TTTCCTTCTC AGTATTCGAT CCATCCAGCA CTTCTTATCG CGCCGACATC
ATATATTCCC CTCAATCTGG CCTAACCCAG GCGCTGAGCC AATATGCCCC CGGGCGCGAG
GTCTGGGTCG ACGGCCGAAA GTTCCGCTCG ATGGCGATTT ACTCGTCATT TCAGAAGGAC
CGAATTAACG CCTATCGTGC TCAGAAGCTC TACTACGAAT GTAGTCGCTG TGGGTACGCA
AAGCTCGAGG AACCCGACGA CACACACCGT CGCGGCGATA CTGAGGACTG CCCGGCCTGC
AAGAAAAAGG CCGGAATGGG ACCCGCAGAG AGTTGGATCG TCCCGGTTGG GTTCGCTCAC
CCTTACGATG AACCGGCCGA GCTAGCCGGT GCCGAAACAC CACTTTCGAC CCGTCCGACA
CGTGCGAAGC TTAGCGCGCC TCAGTTCGAG CAGGAGCAGG AATTGGGGAA ACTCGAGCGC
CCAGACGGCA GTGGTTTTGC TGCGTGGGCA TCCAAGCAAA CATTGATGGT GACGAACTTG
GGTGTTCGCA AAGCGGGAAG TCTGGAAACC GGCTTCCACT ACTGTCCGGC ATGTGGCAGG
ACGGAACCGA CCGGTTGGAC CGAGGGTCAG CTAACGAAGC CGCAGCACCG CCGCCCCTAT
CCTAACTATG GCAAACAACC AGAAATGTGT GCCGGGTACA AACGAGCCAT CGTACTCGGT
CATGACTTCC TGACCGATAT CGCGTTATTT TCGTTCCGGC TATCGCCAGA ACTTCAGGTC
CCCGCGGGTT CGACCGCAGG CCGCATCGTG CTAACGACGA TTGCCGAAGC GCTAAGCATT
GCGGCAGCTG ATCTGTTAGA CATTGACGTG GCGGATATTG GAGGCGGCCA TCGCCCCGCA
CTCAATGAGG GGGGCGCGCG TGGTAGTGAG GTAGAAGTAT TCCTCTACGA CACGGCACCG
GGCGGTGCCG GCTTCGTCCG GTCGGCAGCA CGTGATCCAG GTAAACTGCT TACGCGAGCA
TTAGCAATAC TCGAAACCTG TGAGTGCTCA GCCTCCTGCT ATGCCTGTTT GCGCTCGCAC
AAGAACCGCT GGGATCACGC CGATCTCGAC CGACACCTTG GAGCGACATT TCTGCGCCAC
ATTCTTTATG GGGAGCGGCC TTGGGTCCCG GAGCACGTTG AAGATCGGCT TTTGGACATG
CTAGAGACTG ACTTAATTGA TGCTGGCAAG ACTGTTGTGC GAGGTCCAGA CGGCACGCTG
ACCTTGCCGG AGTACGACGG GCGTACGCTG GTTATCAGTC ACCCTCTCAT TCGAGAACAA
CCGGGTTCAC AACGAGCTTT CGCGCGGGGA AGTAAACCCA CCGACCGCTA CCTCGACCAA
TTACTGGTGG ATCGTGCGCT ACCCGCGGCA GTCCTACGAG CGCTTGATGC TGCCATGGCG
GGCGACAGTG ACGATGCCCC CTTTGCTTTT GCAGACGCCG GCGTGCCGGT TTATCGAGCG
CTATCCCACC TAGAGGGATC GGGACAAGAG TTGCCGCCCG CCTCCGAGTT TGCCGACATT
CCGGACGCAC CAGAAGGCAG CTTTATCGTT CGACTCGACG TTGAAACCAT GGAAATCGCG
AAGCCTGCGC TTGGACAGAC ATACCCTTTT AAAAAGGGGA CATGGCACAT GTTCACGCGT
GTGGAAGAGT CGCGCAGCAA GACTCCTATG CTAATGCGGA GGACCGACGG CAGGGCGTTT
CAATCATCCG GTAGTGAGGT TACCTTTGGC TTGGTAAACG CCAGTGTTAG AGAGAATGGA
ATCGATCGTT ACCGCATCGT GTACGCCTCT TTACGGCCGA CTGCACGAGC CGAGCAGGTC
AACAAGGATG CAGTAGAATT TCTCGGTGCG TTTCATCGAC ATATGGATAG CTGA
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| Protein sequence | MFSELKNLHR ALSAYIEATY HISNPSLVDL RRAILDEQGT ISQQAYVEST PIYQGRRKFA
DLAIPHQARD FLSHLGTAEG GRLVFDPPYD HQADALEIIA GSSARSVLAT TGTGSGKTET
FLLPILMKLA NEAASKPEQF AERAVRSIIL YPMNALVNDQ LGRLRKLLGA PAVRHWFTEH
AGRPAKFARY TGRSLYPGQR TEERNKQRLK SLNFYRDLER GAQTDEAIAS QIRELRSLGR
WPAKPGDDGL ENGMTAWLGS GKRWVGPDQR FQRAIERPED AELLLRHEVQ DQAPDLLITN
YSMLEYMLLR PIERPIFERT KAYFESHPDE RLLFVLDEAH LYRGASGTEV ALLIRRLRNR
LGLAPDRMQV IATSASFADG EAARNFIGDL VGREADTIEV LRGKKFARRP SGSGDLPLAT
ALAACDIKRL KDVDSAHRID ALRPLLTFRR EVLTAERFAL ASAASDVKRI TLNGLDAMLN
PVEETVTVPA HGQIETTSSF LLINEITAVD GISIGRSADK PDLMVIDGQQ KVIRDGLQRA
VHAALKDLPI VGRLVNLTSG AETREDETTL TPRSPIAINE IGALLFEHDI PASIHVPATD
ALLELASYAK AEPEGQPLLA ARVHAFFRGL PGLWGCADVA CSKLPANIRP GPTGMLYPQS
TRECGCRARV FEVHTCRDCG VAYFQAYALN PAQPDFLWAE DVGDLEDVDG VVRPVQILLE
DPGFDADKYC TTAFLDPLTG RVGTQSTSAR QIWLPRPTKN VEPGHFEKCP HCEGNGSQVM
NHQTKGDEPF QELISVQLLD QPARPEAVSP LKGRKSLIFS DGRQAASRLS GKLKDFSLQD
SIRPLLLSGL KMLEQRFDEP IALGYAYPAI LYACAKFDVN FRLPGSEHEE FARDLRKVRN
FVKDHGDLGE FRELAATLNK TRVQSVRAPL TRVLSNRHTG LLPLALAAPQ ALLTENQIKR
LNTLDAPPAG GGTDEEKRRA LLDLWIALSL STGSVMLEGT PSEWIDSREG PQIKRSSGRQ
TGLFEKLFGA RWHRAQFSKN AKPGASWIDF LTDTFAQNEN AEGFFVNAAK VRLRPEQEVR
WRRCGHCTLA QPENLLMGGT CIQCGKQTAL LDPRKDTVFR TRKYLYRKLV ERLEAENDQG
YVPYPFVAEE HTAQLNDAGQ DQAFSRAEWY ELRFQDLDVP GPRGERAGAV DVLSCTTTME
VGIDIGSLTA VALRNVPPGR ANYQQRAGRA GRRGSSLSTV VTFAGSDSHD QRFFAAPQAM
VGGPVPDPVL NLDNREIVQR HAFALMLSLF QQERIEMPEA DGDAQASNIF ESLGKLSEFR
LPDPDGFTFS GLKAWLATNA AFVDAALRDV IPPEAVEEDP ELFFSSLPQE LLRALDSVGA
GEKAVDLVAA SPVIAAEEGP VFDFGIDDYG DDGDMGGVPS DNTAEKAHQN ADANPEAPLQ
PQNLLDRLFA KAVLPRYAFP TDVVSFSVFD PSSTSYRADI IYSPQSGLTQ ALSQYAPGRE
VWVDGRKFRS MAIYSSFQKD RINAYRAQKL YYECSRCGYA KLEEPDDTHR RGDTEDCPAC
KKKAGMGPAE SWIVPVGFAH PYDEPAELAG AETPLSTRPT RAKLSAPQFE QEQELGKLER
PDGSGFAAWA SKQTLMVTNL GVRKAGSLET GFHYCPACGR TEPTGWTEGQ LTKPQHRRPY
PNYGKQPEMC AGYKRAIVLG HDFLTDIALF SFRLSPELQV PAGSTAGRIV LTTIAEALSI
AAADLLDIDV ADIGGGHRPA LNEGGARGSE VEVFLYDTAP GGAGFVRSAA RDPGKLLTRA
LAILETCECS ASCYACLRSH KNRWDHADLD RHLGATFLRH ILYGERPWVP EHVEDRLLDM
LETDLIDAGK TVVRGPDGTL TLPEYDGRTL VISHPLIREQ PGSQRAFARG SKPTDRYLDQ
LLVDRALPAA VLRALDAAMA GDSDDAPFAF ADAGVPVYRA LSHLEGSGQE LPPASEFADI
PDAPEGSFIV RLDVETMEIA KPALGQTYPF KKGTWHMFTR VEESRSKTPM LMRRTDGRAF
QSSGSEVTFG LVNASVRENG IDRYRIVYAS LRPTARAEQV NKDAVEFLGA FHRHMDS
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