| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0154 |
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| Symbol | |
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| ID | 6241656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 172525 |
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| End bp | 173628 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642591916 |
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| Product | porin |
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| Protein accession | YP_001856393 |
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| Protein GI | 186474923 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.167447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.122543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCA CCGTCAGCCG CGCGCTGAGA ACAGGCCGTG AGGCGAGCCC GAAGGCAACT
TTCAAGGCGA CCGTCATCGG CGCCTTGCTG GCCATTGCGT CGACCTCGTC GTTCGCGCAA
TCGAGCGTGC AGCTTTATGG TCAGGTCGAC GAATGGGTCG GCGTAACGAA GTTCCCGGGC
AGCCAGGCTG CCTGGAACGT GTCCGGTGGC GGTATGTCGA CCTCGTATTG GGGCATCAAG
GGTGCGGAAG ATCTGGGCAA CGGCTACAAG GCGATCTTTA CCCTCGAAGA CTTCTTCCGC
GCGCAGAACG GTAAATACGG CCGCTTCGAC GGCGACACGT TCTTCGGCCG TAACGCGTAC
GTCGGTATCG AATCGCCCTA CGGCACCGTG ACGGCGGGCC GTCTCACCAC GCAACTGTTC
GTGTCGACGA TTCTCTTTAA TCCGTTCATC GACTCGTACG TGTTCTCGCC GATGGTCTAT
CACGTGTTCC TCGGTCTGGG CACGTTCCCG ACCTACACGA CGGACATGGG CGTGGTCGGC
GATTCGGGCT GGAATAACGC AATCCAGTAT TCGACGCCCG ACTTCAGCGG CCTGTCGGGC
AGCGCGATGT ATGCACTCGG CAATTCCGCC GATCACAACG GCTCAAAGAA ATACAGCGCG
CAGTTCCTGT ATTTCCACGG CCCGTTCGCG GCGACGGGCG TCTTCCAGTA CGTGAACTTC
AACAACTCGC CGACGGATCT CGGTTCGCTG GTCGCCGGGC TGAAGAGCCA GTCGGTGGGT
CAGGTGGGCG TGTCGTACGA CCTCAAGTAC GTGAAGTTCT ATGGCCAGTA CATGTACACG
AAGAACGATC AGGACGTCTC CAGCTGGCAC GTGAACACGG CGCAGGGTGG TGTGTCCGTG
CCGCTCGGCA CGGGCACCGT GATGGCGTCG TACGCCTATT CGCGCGACTC GGGCGGTCTG
GATCAGATGC ATCAGTCGGC GGCCATTGGT TATGACTATC CGCTGTCCAA GCGTACCGAT
GTGTATGCCG CCTACCTGTA CGACAAGTAC ACGAGCCTCG CATCGGGTTA TACGGCCGGT
GTCGGCCTGC GCGCGAAGTT CTGA
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| Protein sequence | MNTTVSRALR TGREASPKAT FKATVIGALL AIASTSSFAQ SSVQLYGQVD EWVGVTKFPG
SQAAWNVSGG GMSTSYWGIK GAEDLGNGYK AIFTLEDFFR AQNGKYGRFD GDTFFGRNAY
VGIESPYGTV TAGRLTTQLF VSTILFNPFI DSYVFSPMVY HVFLGLGTFP TYTTDMGVVG
DSGWNNAIQY STPDFSGLSG SAMYALGNSA DHNGSKKYSA QFLYFHGPFA ATGVFQYVNF
NNSPTDLGSL VAGLKSQSVG QVGVSYDLKY VKFYGQYMYT KNDQDVSSWH VNTAQGGVSV
PLGTGTVMAS YAYSRDSGGL DQMHQSAAIG YDYPLSKRTD VYAAYLYDKY TSLASGYTAG
VGLRAKF
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