| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_1883 |
|---|
| Symbol | |
|---|
| ID | 9142879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | - |
|---|
| Start bp | 2135871 |
|---|
| End bp | 2139725 |
|---|
| Gene Length | 3855 bp |
|---|
| Protein Length | 1284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_003634163 |
|---|
| Protein GI | 296126911 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.590232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATG GAAACATATA TTTAAGATAT AGAGATAAAG ATGTTGTAAG GCTTAATTCC
AGTATAAAAG AAATAGAAAA AAACTTTCCT GATATTTTTC AAGGTATAGG AGATAATAAG
CGTAAGTTAG AATATTTATT AAGAGAATGC TTTTTAGAGG GTTATAATAA TACTTGTTAT
TTTACAAATG CATCGCATAC CTATACAGAT AAAAAAGGTG ATAAAAGAGA ATCAAGAAAA
TTATATTTAA GACCTAGAAA AAACAGATTT TTAGAAGATA ATATCAGCGA TGATTTAACT
TTATCTTTCA GAGGATACAT AAAAGAAGGG TTTTTTGTTA TAAATGAAAT ATCTATTATT
GGTAATTATG AAGGAGAAAA AGAATTTGAA AAAGAGATAA CTGTTATACC TTATCATACC
AATATACCTT CAGGCTATAG AGGCGAATAT TTAAATGATT TAATAAATAC TACAAAATCT
ATAAGAGAGC ATTTAAATAA CAATCTTATA AACTGGAAAT CTTATTTAGA TTGGAGAGAA
GAACTTGTAA AAATAAGATT GGTAGGTATA AAATATTTTT ATTATTACTA TAATGAAGAA
AAACAGCTTA TAGTATTTCA TTTAGTATCT CCTTCAAAGG CGGATTTTGA CAAAATAAGA
AAGTACTTCA GAAGAGAAAG CATAAAAGTA TTTGATAATG GATATTCTAC AGACAGATGG
ATTTTTCGTT TTAATGAAAA AAACAGAAGT TCAAAAAATG CAGTAAGTTT AGGTAAGTTT
TCTATGATAA TAAAAGAAAT GTCATCTAAA CCTTCAGAAA AGGAAATAGA AGAATTAAAT
AAGCAGTTAC AAAATAAAAA AGAAAAAGGA ATTGATTTTA TAATACCTGA AAATATTAGA
GAAGATATAG AAGCTGTTTC TGATAATCCT TATTTTATAG AGATGGCATT TGAATTAGAT
GAAGATACTT TAGATGATAC AAGAGATTTA TCAAAAGAAG AAATAAGGCA GTATGTTGAT
GAAAATATAT TTAAATATTT TAATGATGAC GGTTTTATAG CATTATCTGC AGTAGGTGAT
TTTGCATTGA TAAGAAGGCT TAGAGAATCA ATAGCAAGTT TGGAAAGAGA TGAGGGATAC
TGTCCCAATC TAGCATTATG GCTTTTTGAT ATTTCAAAGG CAGAAATACC AAATATTAAT
AGTGTAAAAA TAGATAAATG GCTAAATAAA TCAATAGAAA ATAACAGAGA ACAAAATATT
GCTGTAAGAA AGATGCTTGC AACTAAAGAT GTTTGTCTTA TACAGGGACC TCCGGGTACT
GGAAAAACTA CAGTTATAGC TGAGGCAATA TATCAATTTG CTTTAAGAGG TGAGAGAGTA
TTAATAGCTT CCCAGACAAA CTTAGCTGTT GATAATGCAT TAGAAAGACT TGCAAAAGAA
CCTATTATAA GAGCTATAAG ACTTAATGCA AAGAAAAGTA CAGAAGATAT AGCTCATATG
ACTGAAAATA AAGTATTAAG TTTTTTCTTT GAAAATATAT CTGACAAATT AAAAAATGAA
TACTTAAATA AATGGGAAGA AAGCGAGAAA CTTGCAAATA ATTTGGACTT TTATTTAAGA
GATATTAATC AGTATACTTC AAGAATAGAA ATGCATACAA ATAAATTAAA TAATCTAAAA
GAAGAAAAAG ATACTCTGAA CAATCAAATA AATGAGATTA ATAATATAAA AAATAAAAAT
AATGACTTAA ATAGAAGAAA ACATCAAATT AATCTTTTTA ATAAATTTAT AAAAGAAAAT
AATGATGCAG ACTTTGTACT ACCTAAAGAT TATATTAACT TAATACTAGA TAATATAAAT
GATGAACTTC ATTCTTTAGA AAATATAAAA ATTGATGTTC TTAATCTTAA TTTAGATAAT
ATGTCAGAAG ATATACTTAC AAAAGGCATA AAAGAAATAT ATAAAAATAT TAATTATTTT
TATGAATTGA AAGAAAATAT AGCATCTTCC AGCTGTACTG AAGAGTTGCC TGAAAGTATA
CTTTTAAAAA GTAAAATGAA TGAAATAAGA GATAAAATGA GTGATGCTGA TATATCTGAT
GACGATTATG AGAAACTTTC AAAAGAGTTT AGAAATATAA AAAAAGAGAT ATCGCAATTA
AAAAACAATA GCTTTGAATT AAAAGAAACA TATAAAGCAT TATTAGATGA AAGTATAATA
AAAGAATATA ATGATACTAA AAATACTAAT ATTATAAAAG AATGTATAGA TAAAAATATT
TTAAAAATAG AGAAAATAAA AAATGTATTT AATAATATAG AAGAATATTC AAATACTTAT
AAATATTCAT TAAAAGAAGA AGATATAAAA GAACTTGAAA ATAATTTTAA ATCATTACAA
GGCAGAATAA AAATAATAGA TGAAGAAGAA ATAAATTTAA GAAATAGTAT AAATGATACT
AACAAAAAAA TAAGAAATAT AAAAAAAGAA ACGAATATTC CAGAAAATAC TCCAAACAGT
GAAATATATA ATGTATTATC TTCAAAAAGA GATGAAGCTA AAACTCTTTT AGAAAGTCAA
AAAGAGTTTA GAGATAAATT TGGCTCTTTT ATAAAAGATT TTAATGAAAG ATTAGAACAT
GTAGATATTA ATTATGAAAA TGAATATTTT AAAGATACAT ATATAAACTC CTGTAATGTA
GTAGGAATGT CTTGTACAGA AAATATAAAA ATATTGGAAG ATAAAGGTTT TAACGCTTTT
GATGTTGTAA TAATAGATGA GGTAAGTAAG GCAACACCGC CGGAATTATT AATGCCTATG
CTTAGGGCAA AAAAAGTAAT ACTTGTAGGC GACCATAGAC AGCTTCCGCC GCTTTTCGGA
GAGTATGAGA AATCATATAA AGAGATTATA GACACCATAG AAGATACTGA TGAAAATAAA
CAGGTAAAAA ATATTCTTAC AGAAGAAAAT TTTAATAAAT ATGAAAACAT GGTAACCTCT
TCAATATTTA AAACCTATTT TGAGCAGGCA CCTAAAGAAA TAAAACATTC ATTATTAACA
CAGTTTAGAA TGCATAGCGA TATTATGGAA ATAATAAACA GATTCTATGA AAACAGATTG
AATGCTGGTA TACCTAAAGA TAAAGAAGAT GAAGTTAAAG CTCATCAATT GGAAATAAAA
AGAACAAACG GACTTTCATT TATTAAAAGA AATAGGCATG CATATTGGAT AGATTCTTCT
GAAATAAAAT TATCTCAAAA TAAAAAAGCT CCTATATATG AATCAACTAC TCAGACAAGC
ACTTCTATTC ATAATGTACT TGAGGCATAT ATAGTAATAG AGTTATTAAA GCAAATAGCT
TCAGAATACA AAAAAATGAA TTTAGAAAAA AAAGTTCAGG TTGGTGTTAT AAGTTTATAT
CAACTGCAGG TTAATAAAAT AAGAGCTATG TTAAAAAATG AGAGAAGGAA ATTCGATTTT
TCTGCTATAA ATATAGATAT TAATACCGTT GACAGATTTC AGGGTAAAGA AAAAGAAATA
GTAATAGTAA GTTTAGTAAG AAATCCGCAG ACTGGAAAAT CAAAATCTAA ACATATTACT
GCTTTTGAAA GGGTAAATGT TGCTTTTTCA AGAGCACAAA ATGCTTTAAT AATAGTAGGT
GCAAAAAATA TGTATGAAAA ATTAGATGTT GAACTTCCTA ATATGGATAA AAAAGGAATA
ACAAAAAGAA AAGTATATAA AGAAATACTT GAATATTTGT ATAGAAATGC CTGCGTTTTT
GAAAGCGATA CTGTAATAGA TTATAAAAGA GCAAATACAA TATTAAATGA ATATAACAAC
AGTTCTAAAA GATAG
|
|---|
| Protein sequence | MADGNIYLRY RDKDVVRLNS SIKEIEKNFP DIFQGIGDNK RKLEYLLREC FLEGYNNTCY
FTNASHTYTD KKGDKRESRK LYLRPRKNRF LEDNISDDLT LSFRGYIKEG FFVINEISII
GNYEGEKEFE KEITVIPYHT NIPSGYRGEY LNDLINTTKS IREHLNNNLI NWKSYLDWRE
ELVKIRLVGI KYFYYYYNEE KQLIVFHLVS PSKADFDKIR KYFRRESIKV FDNGYSTDRW
IFRFNEKNRS SKNAVSLGKF SMIIKEMSSK PSEKEIEELN KQLQNKKEKG IDFIIPENIR
EDIEAVSDNP YFIEMAFELD EDTLDDTRDL SKEEIRQYVD ENIFKYFNDD GFIALSAVGD
FALIRRLRES IASLERDEGY CPNLALWLFD ISKAEIPNIN SVKIDKWLNK SIENNREQNI
AVRKMLATKD VCLIQGPPGT GKTTVIAEAI YQFALRGERV LIASQTNLAV DNALERLAKE
PIIRAIRLNA KKSTEDIAHM TENKVLSFFF ENISDKLKNE YLNKWEESEK LANNLDFYLR
DINQYTSRIE MHTNKLNNLK EEKDTLNNQI NEINNIKNKN NDLNRRKHQI NLFNKFIKEN
NDADFVLPKD YINLILDNIN DELHSLENIK IDVLNLNLDN MSEDILTKGI KEIYKNINYF
YELKENIASS SCTEELPESI LLKSKMNEIR DKMSDADISD DDYEKLSKEF RNIKKEISQL
KNNSFELKET YKALLDESII KEYNDTKNTN IIKECIDKNI LKIEKIKNVF NNIEEYSNTY
KYSLKEEDIK ELENNFKSLQ GRIKIIDEEE INLRNSINDT NKKIRNIKKE TNIPENTPNS
EIYNVLSSKR DEAKTLLESQ KEFRDKFGSF IKDFNERLEH VDINYENEYF KDTYINSCNV
VGMSCTENIK ILEDKGFNAF DVVIIDEVSK ATPPELLMPM LRAKKVILVG DHRQLPPLFG
EYEKSYKEII DTIEDTDENK QVKNILTEEN FNKYENMVTS SIFKTYFEQA PKEIKHSLLT
QFRMHSDIME IINRFYENRL NAGIPKDKED EVKAHQLEIK RTNGLSFIKR NRHAYWIDSS
EIKLSQNKKA PIYESTTQTS TSIHNVLEAY IVIELLKQIA SEYKKMNLEK KVQVGVISLY
QLQVNKIRAM LKNERRKFDF SAINIDINTV DRFQGKEKEI VIVSLVRNPQ TGKSKSKHIT
AFERVNVAFS RAQNALIIVG AKNMYEKLDV ELPNMDKKGI TKRKVYKEIL EYLYRNACVF
ESDTVIDYKR ANTILNEYNN SSKR
|
|---|
| |