| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3904 |
|---|
| Symbol | |
|---|
| ID | 6197898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010578 |
|---|
| Strand | + |
|---|
| Start bp | 45462 |
|---|
| End bp | 47108 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641703768 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001830920 |
|---|
| Protein GI | 182676812 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.955647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATT CGGCGACGAT GGAAAAGGTG GAAAACGGCT CGTCAGAACG GCTTACGCTT
GATGCGATTG TCATTGGTGC CGGCGTAGCA GGTCTTTATC AGCTCTATCG CTTGCGCGAA
CAGGGCCTGA AGGTCAAAGT GTTCGAGACC GCGTCGAATG TCGGCGGAAC CTGGTATTGG
AATCGCTATC CGGGGGCACG TTTCGATTCC GAAGCCTATA TCTATCAGTA TTTCTTCTCC
GAGGACCTTT ATAAGGGCTG GAGTTGGAGC GAGCGCTTTC CCGCACAGCC TGAAATCGAG
CGCTGGTTGA ATTACGTTGC CGACCGATGC GATCTGCGCA AGGATGTCTA TTTCAACACG
ACGATCAAGA GTGCCCATTT CAATGAGGGC ACAGAGCGAT GGATCCTTGA AACTGACGCA
GGTTTGACGA TTGATGCGCA ATTTGTGATT ACTTGCTGCG GCATGCTCTC TGCGCCCCTC
ACATCGACCT TTGCCGGACA GGATACATTC AAAGGACAGC TCTTTCATAC CGCGCGGTGG
CCTAAAGAGC CGGTCGATTT CTCCGGCAAA CGTGTCGGGA TCATCGGTAA TGGTGCGACC
GGCATCCAGG TCATCCAGAC CATCGCTGAT AAAGTTGGCC ATCTGAAGGT GTTCATGCGC
ACCCCGCAAT ATATCATTGC GATGCGGAAT CCGAAATATG GCAACGAGGA AGTAGCGGCC
TACAAGGACA GATTCCACGA ACTGGCGAAG ACCCTACCGC ATACATTCAG CGGCTTCGAA
TATAGTTTCG AGAATGGCGC ATGGGCGGAT TTGCTGCCTG AGCAACGCCG GGAAATCCTT
GAGACGATCT GGAATGATGG CTCGTTGAAA CTATGGTTAG CGTCGTTTTC CGAGCTGTTC
TACGATCAAA GCGTTTGTGA TGAAATCTCG GAATTCGTCC GCGAAAAGAT GCGGGAGCGG
ATCACCGATC CAAAGCTTCG TGATCTGCTG ATTCCGAGCG ATTACGGTTT TGGCACGCAT
CGCGTTCCGT TGGAAACCAA TTATCTTGAA GCCTATCTGC AGCCCAATGT TGAAATTGTC
AGCGTCAAAA ACAATCCCAT TGAATGCGTC ACCCCGGAAG GGATCAAAAC TGCCGATGGT
ACTGTCCACG CACTCGATAT TATTATCCTG GCCACGGGCT TCGACGCAGG CTCCGGTGCA
CTGACGCGCA TCGATATTCG TGGACGCGGA GCAAGATCTC TGAAAGAGGA TTGGAGCCGC
GACATCCGAA CGAATATGGG GCTACAGATA TACGGATACC CAAATCTCTT CACGACTGGA
GCACCTCTTG CTCCCTCCGC GGCTCTCTGC AACATGACGA CATGCTTGCA ACAGCAAGTC
GACTGGATCA GCAATTGCAT TAAATATCTA CATGATAATA ATCTGAAGGT CATTGAAACA
ACCAAGGAAG CCGAGGATCA ATGGGTAAAG CACCATGACG ATATTGCTAA CAAGACGTTA
ATGACCAAGA CGAATTCTTG GTACATGGGC TCGAATGTCG AAGGAAAGCC GCGTCGGCTT
CTCTCTTACA TTGGCGGGGT TGGGGCATAT CGGCAGAAAT GCGATGAGGT AGCGGCGGAG
GCCTATCGTG GCTTCATCAT GAGCTGA
|
|---|
| Protein sequence | MTHSATMEKV ENGSSERLTL DAIVIGAGVA GLYQLYRLRE QGLKVKVFET ASNVGGTWYW
NRYPGARFDS EAYIYQYFFS EDLYKGWSWS ERFPAQPEIE RWLNYVADRC DLRKDVYFNT
TIKSAHFNEG TERWILETDA GLTIDAQFVI TCCGMLSAPL TSTFAGQDTF KGQLFHTARW
PKEPVDFSGK RVGIIGNGAT GIQVIQTIAD KVGHLKVFMR TPQYIIAMRN PKYGNEEVAA
YKDRFHELAK TLPHTFSGFE YSFENGAWAD LLPEQRREIL ETIWNDGSLK LWLASFSELF
YDQSVCDEIS EFVREKMRER ITDPKLRDLL IPSDYGFGTH RVPLETNYLE AYLQPNVEIV
SVKNNPIECV TPEGIKTADG TVHALDIIIL ATGFDAGSGA LTRIDIRGRG ARSLKEDWSR
DIRTNMGLQI YGYPNLFTTG APLAPSAALC NMTTCLQQQV DWISNCIKYL HDNNLKVIET
TKEAEDQWVK HHDDIANKTL MTKTNSWYMG SNVEGKPRRL LSYIGGVGAY RQKCDEVAAE
AYRGFIMS
|
|---|
| |