| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3603 |
|---|
| Symbol | |
|---|
| ID | 6201646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 4083348 |
|---|
| End bp | 4083965 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641707557 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001834647 |
|---|
| Protein GI | 182680501 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.162578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.242533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCTC GCCAGCCACC CCAGACAGTG CCGACTACCG ATGTCCGCAT TCTCGACATA
GCGGCCGAGC ATATTCGCCG GCATGGTCTT GCCCGGATGA CGGTGACGCG CATCGCCGAG
GAAGCCGGCA TGTCGCACGC CAATATCTAT CGCTATTATC CCTCGAAAGA GGCCTTGATC
GAGGAAATTA CCGCCGCTTG GCTAAAACCT CTTGAAGCGG GCCTGCGCAT GATCGCCGAT
GCGCCTGATC CGGCTTTCGA CAAGCTGGAA CGCCTTCTCT TTGCGATTCA TCGGGCTTAT
CGCGCCAAGC TTGAAAATGA CGCGCCCTTG TTCGATCTGT TTCTCGCTGC CAATGACAAG
AATGCGCCCA TCGCGCGCAA ACATCGCAAC CGCTGCCGAC TCGAGATCCA GCGCACCTTG
GAAGAAGGCG CGAGTGGCGG TCTGTTCGCC ATTACCGATA TGAAAAAGGC GAAAGCGCTG
GTCCTCGACG CATTATATCG TTTTCTGTCG CCTGCCGGGA TTGTGCTCGA TGCCGAAGAA
TCGCGGGCCG GCGTGGAGGC GCGGATGCAG ACCCTCCTCG ATCTGGTACA GGGCGCCTTG
ACACAAGGCC GTTATTGA
|
|---|
| Protein sequence | MRPRQPPQTV PTTDVRILDI AAEHIRRHGL ARMTVTRIAE EAGMSHANIY RYYPSKEALI
EEITAAWLKP LEAGLRMIAD APDPAFDKLE RLLFAIHRAY RAKLENDAPL FDLFLAANDK
NAPIARKHRN RCRLEIQRTL EEGASGGLFA ITDMKKAKAL VLDALYRFLS PAGIVLDAEE
SRAGVEARMQ TLLDLVQGAL TQGRY
|
|---|
| |