| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3198 |
|---|
| Symbol | |
|---|
| ID | 6199312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3638972 |
|---|
| End bp | 3639682 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641707146 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_001834247 |
|---|
| Protein GI | 182680101 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.205342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0244899 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGAAA TCGTTCTGGA TACGGAAACC ACCGGGCTCG ATCCGGCCGA GGGCCACAGG
ATCATCGAAA TCGGCTGTAT CGAAATACTC CACACGATTC CAACTGGACA AATTTTTCAC
GTCTATATCG ATCCCCAGCG CGATATTCCT GAAGATGCCG TCAGGGTGCA TGGCATTACC
GCGGAATTTC TAGCTGGAAA GCCGGTCTTC GCCGATATTG CCTCCGAATT CCTCGCCTTC
ATCGGCGATG CCAAGCTCGT CGCGCATAAT GCCGCCTTCG ACATGCGCTT TCTCAACGCG
GAACTCGGCC TGCTTGGTCT GGAACCGATC GATTCCGAGC GTGTGGTCGA TACATTGGCG
CTCGCCCGGC GCCGTCATCC AGGCGCATCG AACAGTCTCG ATGCGCTTTG CAATCGCTAT
GGCATCGACA ATACGCGCCG CACCAAACAT GGCGCTTTGC TCGATTCGGA AATCCTGGCC
GACGTCTATG CCGAATTGCT GGGGGGGCGC CAAGCCGCTC TCACCTTTGA AACCGCTACC
GCGCTCCGGC AGGACAATAC ACATCAGACC CCATTCCGGC AACGCCCCGT TCCGCTCGAA
AGCGCTCTTT CCTCACAGGA GCGAGACGCC CATCGAGCCT TCATTGCCAA ATTGGGCGAC
AAAGCCATCT GGGTCTCCTA CCTGCCTCAG CCTGAAAATT CCGAGTCCTG A
|
|---|
| Protein sequence | MREIVLDTET TGLDPAEGHR IIEIGCIEIL HTIPTGQIFH VYIDPQRDIP EDAVRVHGIT
AEFLAGKPVF ADIASEFLAF IGDAKLVAHN AAFDMRFLNA ELGLLGLEPI DSERVVDTLA
LARRRHPGAS NSLDALCNRY GIDNTRRTKH GALLDSEILA DVYAELLGGR QAALTFETAT
ALRQDNTHQT PFRQRPVPLE SALSSQERDA HRAFIAKLGD KAIWVSYLPQ PENSES
|
|---|
| |