Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3189 |
Symbol | |
ID | 6198446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3628935 |
End bp | 3629714 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641707137 |
Product | phage integrase family protein |
Protein accession | YP_001834238 |
Protein GI | 182680092 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000104193 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.041217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGTGC GCAAAAGAAG CTGGACGACA GCGAAGGGCG AAAAGAAAGA GGCTTGGGTT GCCGATTATG TCGATCAGAC CGGCAAGCGG CACCTCAAGA CCTTCGATCG CAAGAAGGAC GCGGACGCCT TTCATTCCAA GGCCAATGTA GAGGTTCGAG AAGGCACCCA CACACCTGAT AGTGTGAGCA AAACTGTCTC GGAAGCTGCC GACTTATGGC TTGAGACCTG CGATGCGAAT CACCTCGAGG CCGCGACGAT CGATGCCTAT GAGCAGCATG TTCGGCTGCA TATCAAACCA TTCCTCGGCC GAATGAAGCT TTCGCAGCTC ACGGCGCCGA TGATCCGAGA ATTCGAGGAC AAGCTTCGCC GCGGCGATCC AGCGCCTGGC AAGGATGAAG GCAAGAAGCG ATCGCCAGCA ATGGTTCGCC GCGTGCTGAT ATCGTTGAGC ACTATGGTTG GCGATGCCCA AGAGCGCGGC CTTGTGGCGC GCAATGTCGT CAAGGACCTT CGGGCAAGGC GAAAGCCCGG CAAGCAAAAG AAGCACGAGG ACCGGCACGC CGGCAAACTC AAGGTCGGCG TGGATATTCC TACGCCGGGA GAGATTCGCG CCTTTGTGGG CGCCCTACAA GGGCTCTATC GGCCGATCCT TTTGACCGCA GCTTTCACTG GCCTTCGTGC TTCAGTCTTG GAATCCTTGT TGCGACAAGC GATATTCCAG GCACGTTCCG GCTTCATAAT CGTGGAGAGG AAACTGCCCG GGATCCCGTC GAACCCTTAA
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Protein sequence | MSVRKRSWTT AKGEKKEAWV ADYVDQTGKR HLKTFDRKKD ADAFHSKANV EVREGTHTPD SVSKTVSEAA DLWLETCDAN HLEAATIDAY EQHVRLHIKP FLGRMKLSQL TAPMIREFED KLRRGDPAPG KDEGKKRSPA MVRRVLISLS TMVGDAQERG LVARNVVKDL RARRKPGKQK KHEDRHAGKL KVGVDIPTPG EIRAFVGALQ GLYRPILLTA AFTGLRASVL ESLLRQAIFQ ARSGFIIVER KLPGIPSNP
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