Gene Bind_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3138 
Symbol 
ID6201790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3581907 
End bp3583013 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content60% 
IMG OID641707086 
ProductCarD family transcriptional regulator 
Protein accessionYP_001834188 
Protein GI182680042 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCG TCAATAAGAC TGGAATAGCG ACCGAGACGC AAACAGCCAA GGGCCAGACC 
GCGCATCCCC CTGCCGCCGA GGTCGTGTCG CTTTCCGTCG CCTCTGCTAT CGACAAAAAC
GCGTCCGGTT CCCCGGATCT TCATGCTTCC GTTGCTTCAT CTGACGACAA TTCCGTTATG
TCCATCCCCG ATGACGGAGA GACCACCCTT TCCACAGCCG AGAATGGCGC CATTTTCTCC
CAGCCTTTGA AATATCAGCC CCCAAGACAA ATGATCGGAC CCCCGGTGAC CAATAAAACA
GACAAGAAAA CAACTGAGGC GGCCGCCGAC GCGCCCGTCG AGACCGCAAT GACCGACACG
TCCCTCAATC AACCGGTTCA AAATCCTTCC CTTGCCGGCA AAACCGTGAA AACGACGAAG
CCCGCCGTCA AGCCTGCCGC CGCGAAATCC ACGCCACCGG TAAAGACCAC CGCCGCAGCC
GGTGCCAATG AGAAATCGCC AGCGGCGAAG CCCACGGGCA AGGCAGCCGG CAATGCCCAG
CGCCATGGTT TCAAGCCGCT CGAATTCATC GTCTATCCCG CTCATGGCGT CGGTCAGATC
ATCGCCATTG AGGAGCAGGA AGTCGCGGGC TTCAAGCTCG AGCTTTTCGT GATCAGTTTT
GTCAAGGACA AGATGATTCT GAAGGTTCCG ACGCCCAAGG CCGTCAGCGT GCGCATGCGC
AAGCTCGCCG AGGCGGATGT GATCGACAAG GCGCTCGAAA CCCTCACCGG CCGGGCGCGG
ATCAAACGGA CCATGTGGTC GCGCCGGGCA CAGGAATATG AGGCGAAGAT CAACTCCGGC
GATCTCATCG CCGTTGCCGA AGTGGTGCGC GATCTCTACC GCTCCGACGC CCAGCCCGAG
CAATCCTATT CGGAACGCCA GCTCTACGAG GCTGCGCTCG ACCGTGTCGC ACGCGAACTC
GCCGCCGTCC AGAAACTGAC CGAAACGGAA TCCTTGAAGC TCATCGAGGC GCAATTGCTG
AAAGGTCCTC GTCGCGGCGG CAGCAAGGTC GAGGAAATCG ATCTCGACGA TGCGGACGAG
GATGGCGATA TCGAGGAAGC CGCATAA
 
Protein sequence
MASVNKTGIA TETQTAKGQT AHPPAAEVVS LSVASAIDKN ASGSPDLHAS VASSDDNSVM 
SIPDDGETTL STAENGAIFS QPLKYQPPRQ MIGPPVTNKT DKKTTEAAAD APVETAMTDT
SLNQPVQNPS LAGKTVKTTK PAVKPAAAKS TPPVKTTAAA GANEKSPAAK PTGKAAGNAQ
RHGFKPLEFI VYPAHGVGQI IAIEEQEVAG FKLELFVISF VKDKMILKVP TPKAVSVRMR
KLAEADVIDK ALETLTGRAR IKRTMWSRRA QEYEAKINSG DLIAVAEVVR DLYRSDAQPE
QSYSERQLYE AALDRVAREL AAVQKLTETE SLKLIEAQLL KGPRRGGSKV EEIDLDDADE
DGDIEEAA