| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3033 |
|---|
| Symbol | |
|---|
| ID | 6198142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3455911 |
|---|
| End bp | 3456837 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641706981 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001834084 |
|---|
| Protein GI | 182679938 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.244321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTCG CTGTTATTCT TATCAATTGG AACGGCTGGC GTGACACATT GCGTTGCTTG
CAATCCCTCG AGCGGTCTCA ACTGACATCA TGGCACGCCA TCATCGTCGA TAATGCCTCA
ACGGATGATT CACTCGACCA TCTTCATAAT CTCGGCGAAC GGGTAGAGGT CATCGCAAGC
CCGAAAAACC TGGGCTGGAC GGGCGGATGC AATCTCGGCA TCAAAAGAGC CATCGAGCTC
GACAGCGAAT ATGTTTTTCT TTTGAACAAT GATGCTCTTG TTGATGAGAA TACACTCTCA
ATATTGATAT CGGAAGCGAG CAAACTCGGC GATAGAGCAG CCGTGAGTTG CGTTGTGCGT
TTTTCGCCTT CTGGCGACTA TCAATTCTTT GGCAGTTCAA CGATTAGCCG CTCTGGACAG
CCATTCTGGT ATTCGGACAA GCACAATAAA AGCGCTCTCA ATAACAAACT TATTCCCACC
GACTTTCTGT TCGGGGCCGG CATGCTTGTC CCGACAAAGG TCTTTCAGCA TGTCGGTTTG
TTCGATGATC GGTTTTTCCT CTATGTCGAT GAAACGGAAT GGTCGGTGAG GGCACGCGAA
AAAGGTATTT CCCTTTTTGT CGTCCGTGAT GCCGTCATTC ACCACCTCGG GAGTGCCTCG
ACAGGGGGGA ATGGTTCACC GCTCCAGACC TATTTCATGA TCCGGAATTC CTTGCTGTTT
TCCCGTCTCC ACGGAACCTT TTCCCAACAA ATTGTTCTGT TTCTCATGAC GGTCCGAGAC
ACAGCTCGCT CATGCCTGAA AAAGGGTGTG GACGATAACA GCCGCAGAGC CGCAAGACTG
CTGGGCATGT TTGATTTTAT ACGGTGTAAA TTCGGGGATT GCCCGGATGT CATCCGGCGC
TTGCAAGCCA AACAATCATC TCGTTGA
|
|---|
| Protein sequence | MDVAVILINW NGWRDTLRCL QSLERSQLTS WHAIIVDNAS TDDSLDHLHN LGERVEVIAS
PKNLGWTGGC NLGIKRAIEL DSEYVFLLNN DALVDENTLS ILISEASKLG DRAAVSCVVR
FSPSGDYQFF GSSTISRSGQ PFWYSDKHNK SALNNKLIPT DFLFGAGMLV PTKVFQHVGL
FDDRFFLYVD ETEWSVRARE KGISLFVVRD AVIHHLGSAS TGGNGSPLQT YFMIRNSLLF
SRLHGTFSQQ IVLFLMTVRD TARSCLKKGV DDNSRRAARL LGMFDFIRCK FGDCPDVIRR
LQAKQSSR
|
|---|
| |