Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2226 |
Symbol | |
ID | 6199407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2552635 |
End bp | 2553534 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641706215 |
Product | DNA polymerase LigD polymerase subunit |
Protein accession | YP_001833333 |
Protein GI | 182679187 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
TIGRFAM ID | [TIGR02776] DNA ligase D [TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGTTG CCTTAACTCA CCCCTATAGG GAATTCTGGC CCGATGCCGA CGACGGCAAA GCGGTCACGA AAGAGGATCT CGCCTATTAT TTCGAGACCG TGGGCGCGTG GATGATGCCC CACATAGAAG GACGGCCCCT TTCGATCTTG CGCGCGCCGG AAGGGCTTGG CGGGCAACTT TTCTTCCAAC GCCATGCCGA ACCCCATACG GACTCATTCC TCAAGACCAT GCCGCTCGAT GGCGAAGCTA AACCCTATTT CACAGTGGAT TCGGTCGAAG GGCTGATTTC CCTGGCGCAG ATCGCCGCGC TCGAACTGCA TCCGACCAAT GGCCGGCCCG GCGAGCCTGA AGTCCCAGGA CGGCTGGTCT TCGATCTTGA CCCGGGACCC GGCGTGGCCT TCTCCATCGT GACCAAAGCG GCGCATCAAT TACGCGACCG CCTGGAGGTT TTGAACCTCG TTCCTTTTTG CAAGACAACC GGCGGCAAGG GTCTGCATGT CGTGACCCCT TTGACGGCGC CCACAACAGC GTCTTCGGAC TGGGCCATGG CGAAAGCCTG CGCGGAGGAA ATCTGCGCCC GCCTCGCGGC CGAGGAACCC GATCTCTACA TCGTCAATAT GGCGAAGAAG CACCGCCAAC ATCATATCTT TCTCGATTAT CTCCGCAACG ATCGGATGGC GACCGCCGTG GCGCCCCTTT CGCCCCGGGC GAAGCCTGGC GCTCATGTCT CCATGCCGCT GACCTGGGAT CAGGTGACCG ACGATCTCGA TCCCAAAACG TTTACCTTGC GCACCGCCCC GGACCTCTTG GGCAAGGCCT GGGCGGATTA CCATAAGGCC GAACGTCCCC TGGATGAGGC TTTGAGACGC CTCGGCAAGC TCAACTTCGC GAATGGTTAA
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Protein sequence | MGVALTHPYR EFWPDADDGK AVTKEDLAYY FETVGAWMMP HIEGRPLSIL RAPEGLGGQL FFQRHAEPHT DSFLKTMPLD GEAKPYFTVD SVEGLISLAQ IAALELHPTN GRPGEPEVPG RLVFDLDPGP GVAFSIVTKA AHQLRDRLEV LNLVPFCKTT GGKGLHVVTP LTAPTTASSD WAMAKACAEE ICARLAAEEP DLYIVNMAKK HRQHHIFLDY LRNDRMATAV APLSPRAKPG AHVSMPLTWD QVTDDLDPKT FTLRTAPDLL GKAWADYHKA ERPLDEALRR LGKLNFANG
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