Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2179 |
Symbol | |
ID | 6199832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 2489256 |
End bp | 2489888 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641706168 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001833288 |
Protein GI | 182679142 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.277045 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCGC AAAAGTCAAC GGCCGTGGCC GCGGTTGCAC CAAAGCGTGA GCGCGGCCGA TTTCGCGTAG CGGCGATCAT GGATGCCGCC GCAGCTCTCT TTGCGGAAAG GGGTTATGAT GCCGCGACGA TGACGGAAAT CGCCGCGCGC TCGAAGACGG CTATCGGCTC GCTCTATCGC TTCTTCCCGA CCAAGGAGAG CCTCGCCGAT GCCTTGCTGA CACGTTATGG TGATCTCATG ACGAGACGGC TCGATGAGAT CACGGAAGCG GCTGCTTCTC TTTCGTCATC CGCCCTGGCC GATTCTCTTA TTGACCTCAT GCTCGAACGG CAGGCGGATC GCGCCGCCGC ACTTGTCCTC ATCGAGGCTC ACAGTTCCCC CGCCGACAAG CGCTCCACGC TCCGCGCCGT CACACATCGA CGGATCGCGA CGCTTCTCGT GAGTGTGAAC GGAACGCTGC CACAGGCCAG GGCCGAAACC ATGGCCATGC TGCTTCTGCA TGTCCTGAAA GCCGTGCCCA TGCTGGCCTG TGAAGGAGGG GAAATAAGGG AGGACTTGCT GGCGGAAACG CGTGAACTGG TCCGGCTCTA TGTTGCCCAT ATTATGCGAC CGACAGGCGA GGGTGTGTCA TAG
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Protein sequence | MSSQKSTAVA AVAPKRERGR FRVAAIMDAA AALFAERGYD AATMTEIAAR SKTAIGSLYR FFPTKESLAD ALLTRYGDLM TRRLDEITEA AASLSSSALA DSLIDLMLER QADRAAALVL IEAHSSPADK RSTLRAVTHR RIATLLVSVN GTLPQARAET MAMLLLHVLK AVPMLACEGG EIREDLLAET RELVRLYVAH IMRPTGEGVS
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