Gene Bind_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1401 
Symbol 
ID6200790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1609543 
End bp1611687 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content60% 
IMG OID641705397 
Productfusaric acid resistance protein region 
Protein accessionYP_001832530 
Protein GI182678384 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.855004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGC CACGTGCATT CGCCTCGCTG ATGCCCTCCT CTGCGGCAAT TGGAAAACTT 
CCGGACGGCT TTCACTTGCC AGAGGGCACT TGGGCAGAGG GCACTTGGGC CTTTGTGTTC
CGCACCTGGC TTGCCGCCTG CCTGACCCTT TTATCCTGCT TCTACCTCCA ACTCGAATAT
CCCGCGACGG CCGTCGTCAG CACAATCATT ATCGCGCAAC CCGTCGCGGG CATGGCCTTG
TCGAAGGCGA TGTATCGTTT CGTCGGCACG ATTGTCGGCG CCATCGTCGC CTTGCTCCTG
ACCGCAGCCT TCGCCCAGGA CCGCACCATG CTGCTCGCAG CCTTTACGCT GTGGATCGGT
ATTTGCGCGG GCGTCGGCAC GATCCTGCGC GATTTTCGTT CTTATTCTGC CGTGCTCTCC
GGCTATACGG TCGCGATCAT TTCGATCGCC CATATTGATG AGCCGTTGCA TGTCTTTGAT
GCCGCCGTCG CGCGCGTCTC GGCAATCAGC ATCGCCATTC TCTCGACCGC TATCGTCAAT
GAAATCTTCA GCCGCCATCA CGCATGGTCC AACCTGTTGC GCGCCATCAA GGTAAATGTC
GCGACTATCA AACTGCAACT GAGCGCGGTC TTGGACGAAC AAATCGCGCC CACCGTCGAA
CAACGCATGG CGCTTGCCGC CGCCCTCATG CCCTTGCGCA GCCAATTGAC CTATGCGGGT
CCGGAACTTT CCGACGGTCC TCAACGCATG GCTGGCGCGC GCAGCGTCAT CCTCGCCTTG
TTCGATATGA TTTCGATCAG CTTCGCTCTC ACGCTCGGCT TGCGAGAATT GCCCGAGCGC
CGGCCCTTCA TCACGCAGGG CATTAGCATA GCCCGCAAGG CCTTGAACCG ACCCTATCCG
GAACAATTGC GGCTCGAACT CACCAATCTG ATGCGCAAGC AACTCGAAGC GGGAGATTTG
ACGCTTCAGG AAGCTTTCGT TCTCGACCGG CTCGACCGCC TCTTCGAGCA ATATGCCTTT
CTGCGTGACG GCCTGCGGGC CATGCGTCTT GGCCACACCC CGATCCGTAC CGCCGCCTTG
CCGGTCCATC AAGATCCCAT GACCGTCTTC CTGAATGCTC TACGGGTCGT TCTGGCGGTT
GGCCTCAGCT GCTTTCTCTG CGTCTTGTCG GGCTGGCCCG GCACGTCCTT CGCCATCGTC
AACACGGTTT CCTTCATCGC TCTTGGCGCT GTCAGCGACA ATCCGATCCT GACCGGCCGC
GCGGCCCTCA TCGGCTTTCC CCTAGGCGTG TTGACGGCAG GTCTCTGCTT CTTCTTTTTG
CTCCCAGCGA TCAGCGGCTT TCCCTTATTG ATGGTGCTGA TCTTTCCCTT CGTCGCGCTC
TCCTGCCTGC TCATCGCCTT GGGGCAATCG CAAATCGGCA TGTTGTCGGG CGTGGTTTTC
TTCCTCCTCA CCGCCCCGGC CAATCCCCAG ATCTACGATC CCCAGGTTTT CATCGACCAT
GCGGTCCTCC TGGTGTTCGG CGGCGTGACC ATTTATGCGT CCCTATGGCT GGCGCTTCCT
GTTTCGCTGT CGCGCCGACT GCTGCGCCTG GCCTTCGCCT TCGCCGATGA TCTGCACCAT
ACGCTCCGCG GAGAATCCGG TGTCAGCGAG GAAGATAAAG TCAGCGTGCA ATATGATCGC
TGGAGCCAGG TCCACCGCTA TGCCACGGCG CGCCCAATGA CTCTCGGGCG ACGCAATCTC
CTGGAGCAAT TCTCCATTCT CGGCGATCTG AGCATTCTCG TCAGACGGGC TCAGGTCGCC
CTGGCGCGCG CGCCCTTGAC CAGTGAGCAA CGCACGCAGG CCCGCGCCGC CTTGACCAGT
CTGCAAATCG ATCCCTTGAT TCAGGCGGCG CAACATCTCC TCAGTGATGC CAAAGGGCAA
CGCGGATTGA ATAGCCTGAT GCTGCTGCGC GCCGCCGCGA GCCTCTATTG CATCACGCTT
CTGCTGAAGA AGGGCCAGCC CTTTCTGCGT CATTTCAAGC TTCACGAGAC TCGTGGCCAT
GTATCCGCGC CCGAGCGAAC ATCCCTTCCG CCGCCACCCA TCGCCGCAAT CTCGCCCACG
AGTGCAAAAC TGCATCCTTC TTATACCAAC GGTCATAATC AATGA
 
Protein sequence
MTWPRAFASL MPSSAAIGKL PDGFHLPEGT WAEGTWAFVF RTWLAACLTL LSCFYLQLEY 
PATAVVSTII IAQPVAGMAL SKAMYRFVGT IVGAIVALLL TAAFAQDRTM LLAAFTLWIG
ICAGVGTILR DFRSYSAVLS GYTVAIISIA HIDEPLHVFD AAVARVSAIS IAILSTAIVN
EIFSRHHAWS NLLRAIKVNV ATIKLQLSAV LDEQIAPTVE QRMALAAALM PLRSQLTYAG
PELSDGPQRM AGARSVILAL FDMISISFAL TLGLRELPER RPFITQGISI ARKALNRPYP
EQLRLELTNL MRKQLEAGDL TLQEAFVLDR LDRLFEQYAF LRDGLRAMRL GHTPIRTAAL
PVHQDPMTVF LNALRVVLAV GLSCFLCVLS GWPGTSFAIV NTVSFIALGA VSDNPILTGR
AALIGFPLGV LTAGLCFFFL LPAISGFPLL MVLIFPFVAL SCLLIALGQS QIGMLSGVVF
FLLTAPANPQ IYDPQVFIDH AVLLVFGGVT IYASLWLALP VSLSRRLLRL AFAFADDLHH
TLRGESGVSE EDKVSVQYDR WSQVHRYATA RPMTLGRRNL LEQFSILGDL SILVRRAQVA
LARAPLTSEQ RTQARAALTS LQIDPLIQAA QHLLSDAKGQ RGLNSLMLLR AAASLYCITL
LLKKGQPFLR HFKLHETRGH VSAPERTSLP PPPIAAISPT SAKLHPSYTN GHNQ