Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1095 |
Symbol | |
ID | 6199922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 1255217 |
End bp | 1258228 |
Gene Length | 3012 bp |
Protein Length | 1003 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641705087 |
Product | Sel1 domain-containing protein |
Protein accession | YP_001832226 |
Protein GI | 182678080 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAACAGG ATTCGGGACA GGATTTACCG CGTAGTGCCA AGGCCCAGAC AGCTCCACTT GGGAAGGGGG CGGCGGTCTC GCGCAGGCCT GCATTTTTGG CAGGAACCGA AACCTTGGAA GAACGGGCTC AGAGGGCTTG GGCTTTCGCG CATAATAGAG GAATGATCCG GGCGCTCGAG AATCGCCGTG ACCGGGAATG GGAAATGGTC GCCAGTCTTT CCTGCTCCGG AGAGGATGGA TTTCTTCCGT TCGATGAATG GCAGGCGGTA CGCTCGGATG GCCATGGGTT GCAAAGTGAC GAGTTGCGTC GGGAGACGAC TTTGGGAGCG GATTTCAAGA CCGGTCGCGG ATTGCCAGAG GGTCAGGCTT CTCTCGAAGG CCTGTGGAGC GAACTTGAAT CGGAATTACT GGCCTTCGCC CGCCGTCGTG GCCATGCTTT CGCTTCCAGC GGCCGGGTCG GCGTGGATCA TCGGCAGAAC GCGGCAAAAG GACCGGGCGC GAGTAGCACC GCCTCAGCAG CCCAGAGCGC TTCTTTGTCG GACTTACGGG ATGATGTCGG TCAACTCGCT GGTCAACTCG ATGCCATGCG GCAGGAAGCG GATCGTCGCG ACAGCCTGTT GCGGAGCCAG GCGGAACGCA TTGGCGACAT CGGGCGGTTT CGCAAGGAAA TCAGCGATCT GACGAGCCGG CTCGGTGCTT TCGCGCCGCT GGAGGCCTTG CGTGAACTTG ACCGGGAAAT CAAGGCTATT GCCCAACGGT TTGAAAAATT AGGGGAAACC GAGAGCGACG CCACCCCGAT ACTGCGCTTG CGGCAGCAAT TGCATGAAAT TCGCGAACTC ATCACGGCCA TGGCGAGCCT TGCGGAAAAT ACGGTTCGGC AAAAGCCGGC CGCTGATCTG GAAGTCTTGC GAGGGACGTT GAACGATCCG GTCCGTGCGG AATCGCTGCA GAAGATCGAG ACCCAGATCG AGGTTTTGGG GCAAAGGGTC GATACAGCCA TCGCGCAGGC GGAAACATCC GGGCAATATG CCGCCCTGGC GCGGCAGATC GAGGCCGTCA AACACCAATT GACGGCGCGC ATCGACGCCA ATGCCACGCT CAGCGCGCCG CATACGCAAC AACTCGAACA ATTGGTGCGT GTGCTGGCCG ACAAAATGGA TTCCTTGCCC GATCCGCGCA AGAGCGAACA GAAGTTCGAG GTTCTTCAAT CCGAACTCGT CCGGATCGAC AATCGCCTCG ACCAAAGTGA CAAGATCATC GCCTCTCTGG CGGCCATGGA AATGACCATT ACGCGGCTTT CCGCCGAGAT GGGCGTGATC AAGGGCTCGT TGCGGCAATC TGCCGAAGCG GCCGCGCGTC AGGTCATTGA AGAGCTTCGG CAGACATCCT CCACGGAACC TCTGATTCCG GCTGATTTGG AAAACGAGAT CGAAAAACGG TTCGAGCGCA CCGAGGTCAT GATCCGCGAT GGCCTGGAGA GACTTGCCAG CCGGCTGACC GATCTTGAAA CCGTTACACA TCTGGCTCGA GGCCCTGTGA CACAGGCCGG GTCCCTGGGA TCATTGCTGG CGCCGATCTT TGCACCCGCC AGCGAGGGGC AAGGGGAAAC AGCCAGTGTT TTTAATATTT CCCTCGACAA GGCTCCGGGA TCGGTGCGGG AAGACCTTGA CCCCTGGCGT TCTGAGCGGG TCTCCTCGGT ACGCGGTTCT GTCTCGGCAG GCCAGAAAGT TTTGCCTCGT GCGGAGACAG GGCCGGTTCC CCTTCAAGGT GAACGCCGGG CCAGGCAAGA GAACAAGGGC CCCACGCTGG TCGAGGATGA ATTGCTCGAA CCGGGCAGCG GCCGTCCCCT CTTGTTGCGC TCCAGCGGAA TGAAGAAAGG GACTTTCAAG GATCGTGAAT CCGAGGCGAT CGCGGGGCCC AAGGCCAGAA TGAAGCAAGG GGAATCCGTG CCGAAGGGTG CGGACAAACT GGTCCTTCCG CCTTCGCGAG AGCAATCCAC CTCTTTTGAT CGGATGATCC GTCTGCTCAA AAGCGCCCGC CATTTGGTCC GGGGACGGCT AGTCTTGTTT TCGCTCGCGG GACTTTTCTC CCTGGCCGTC CTGGATGGAT TGGTGCATGC CATCGGGAGC ATGGATCAGC GGAACAATGC GGGCCATGCG GAACAATCCG GTCCGGCCAA GACCGCGAAT TTTGTGGAAA CCTCGCCGCA GTCCTCAGCG CCAGCCGCCA CAATTCCGGC CACGACCCAG AAAACATCCG AAACCCCTGC CGCAGCCAAA TCCAGCATAA ATAAAGTGGG GGCGCTGGCC TTTTCGACAC GGGAAGACAT TCTGCGCCTC TTCCGCTTGG GTGAAGCCGG CCATGCCGGC GCGCAATATC ATCTTGCCTT GCTCTTGCAG GAAGGCACGG CCCATGCGGA AGGAAATGAC CAGGCGACGG ATCTGCGCGC CGCCGCTTTT TGGTACGGGA AAGCCGCTGA CCAGGGTCTC GCCCCGGCGC AATATCGGCT AGGCCTGCTC TACGAAAAAG GCTTCGGCGT AGACCGCGAT CTTCACAAGG CGACGGATCT TTATCGCCAG GCGGCGGAGC AGGGCAATAC ACGCGCCATG CATAATCTTG CTGTCCTCTC GGCCGAATCC GAAAATGGTC CGCCTGATTA TGCGGCCTCT GTCAAATGGT TCACCAAGGC CGCCGAATAT GGCCTGCGCG ACAGCCAGTA TAATTGTGCG ATATTGCTCG CCCGGGGGCT CGGCGCGCCG CGCAATCTGG TTCAGGCCTA TGCCTGGTTC GCCATTGCGG CGGCTCAGGG AGACGAGGAA GCCGGTCGCA AGCGCGATGA AGTGGCGCGG CATCTTTCAA CGGAAGATTA CACAGCGGGC AAAACCATAG TCGCCGCATA CAGGCCCCAG CCGTCCAAAA TGGCGGCTAA TGAAGTGTCT ATGCCTTCAG GCGATGGGGA GCAGGGATCG CGCCAGGCCG AGGTGATGAA GCCGAGCCTT TCTGGTCTGT GA
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Protein sequence | MEQDSGQDLP RSAKAQTAPL GKGAAVSRRP AFLAGTETLE ERAQRAWAFA HNRGMIRALE NRRDREWEMV ASLSCSGEDG FLPFDEWQAV RSDGHGLQSD ELRRETTLGA DFKTGRGLPE GQASLEGLWS ELESELLAFA RRRGHAFASS GRVGVDHRQN AAKGPGASST ASAAQSASLS DLRDDVGQLA GQLDAMRQEA DRRDSLLRSQ AERIGDIGRF RKEISDLTSR LGAFAPLEAL RELDREIKAI AQRFEKLGET ESDATPILRL RQQLHEIREL ITAMASLAEN TVRQKPAADL EVLRGTLNDP VRAESLQKIE TQIEVLGQRV DTAIAQAETS GQYAALARQI EAVKHQLTAR IDANATLSAP HTQQLEQLVR VLADKMDSLP DPRKSEQKFE VLQSELVRID NRLDQSDKII ASLAAMEMTI TRLSAEMGVI KGSLRQSAEA AARQVIEELR QTSSTEPLIP ADLENEIEKR FERTEVMIRD GLERLASRLT DLETVTHLAR GPVTQAGSLG SLLAPIFAPA SEGQGETASV FNISLDKAPG SVREDLDPWR SERVSSVRGS VSAGQKVLPR AETGPVPLQG ERRARQENKG PTLVEDELLE PGSGRPLLLR SSGMKKGTFK DRESEAIAGP KARMKQGESV PKGADKLVLP PSREQSTSFD RMIRLLKSAR HLVRGRLVLF SLAGLFSLAV LDGLVHAIGS MDQRNNAGHA EQSGPAKTAN FVETSPQSSA PAATIPATTQ KTSETPAAAK SSINKVGALA FSTREDILRL FRLGEAGHAG AQYHLALLLQ EGTAHAEGND QATDLRAAAF WYGKAADQGL APAQYRLGLL YEKGFGVDRD LHKATDLYRQ AAEQGNTRAM HNLAVLSAES ENGPPDYAAS VKWFTKAAEY GLRDSQYNCA ILLARGLGAP RNLVQAYAWF AIAAAQGDEE AGRKRDEVAR HLSTEDYTAG KTIVAAYRPQ PSKMAANEVS MPSGDGEQGS RQAEVMKPSL SGL
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