Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0957 |
Symbol | |
ID | 6200378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1093866 |
End bp | 1095194 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641704949 |
Product | chloride channel core |
Protein accession | YP_001832090 |
Protein GI | 182677944 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0796788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCCC TTTCTTCCCA ATTGCGCCGC CTCCTAGGCC TTTCGTATCC AGCTCTGCAA ACCCTTCTGC GCCGGACTTT CTTTCTCATT GGCGGGCTCA CGGTCGGCGG TGTAGCTGTG CTGATGGCCT TTTGCGCCGA TCAAGCTCAG ACTGCTTTCA CGGCTCTCCT TGGCCGGTGG CCCAATGCCG CCTTTCTCAT CACGCCAATA GGCTTCGGCC TTGCCTGTCT GCTCGCGCAG AAAGTCTTTC CGGGTTCGCA AGGCAGTGGC ATTCCGCAAG TCATCGCCGC GCGGCGTGTC ATTGACCCGA AATCCCGCCT CTCGCTGGTT TCCGTCCGGA TCGCCATTGG CAAAATTTTG GTGATGATCC TTGGCCTTCT CTGTGGCGCC TCGATTGGCC GAGAGGGGCC GACGGTTCAG GTTGGGGCTT CGATCATGGG GGCCTTCGGT TACAAGGCTC CCCCTTTTAT CCAGCCGGGC CTTTTACTCG CGGGCGGAGC GGCCGGCATT GCCGCAGCCT TCAACACGCC ACTCGCCGGC ATTGTTTTCG CCATCGAGGA ATTGAGCCGA TCCTTTGAGG CCCGGACAAG CGGTCTGGTT CTCGGCTGCG TTATCGCCGC CGGCCTCACC TCACTCGCAG TCGTCGGTGA TTATACTTAT TTCGGTTCGA CCGACGCCAT TCTGCCGCTC GGCCCCGCCT GGATCATCGT CCCCCTCTGC GGTGTCATCG GTGGGCTTGC CGGAGGTCTT TTCAGCCGGA TTCTCATCCT GTTTTCAACA GGTTTGCGCA GCACATTCGT CAAGCGGCGC CCCATTATCT TCGCCATGAT CTGCGGCCTC GGAGTCGCGG CTTGTGGTTT TCTGAGCCAG AATTCCATCT ATGGAACTGG CTACGAGCAA GCCCATGCTA TCGTCCATGG TGACGACACG CTTCCCGCCA CTTTCAGTCT GTTCAAATTT CTGGCCTCGA CCTTCTCATC AATTGCCGGC ATTCCCGGCG GTGTGTTCGC GCCCTCGCTT TCCGTCGGCG CCGGGCTTGG CGCTTCGATC CATCACCTTT TTCCCGTGGT GCCGCTCGGT GCCCTCGCCC TTCTCGGTAT GGTCGGCTAT CTCGCGGGCG TCGTGCAAAC GCCCATCACC TCTTTCGTAA TCGTCTTGGA AATGACTGAG GATCACGCGA TGATCATTCC AGTCATGGTC ACGGCCCTCA TCGCCAATGC GGCCTCGCGG GTCATCTGCG GCGATGGACT CTATCACGCC CTATCGCGCT CCTTCCTCGA GAAACTGCCC AAGGGCCATG TCCTGCCCGA ACAGACCGAA GGGCTTTAA
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Protein sequence | MASLSSQLRR LLGLSYPALQ TLLRRTFFLI GGLTVGGVAV LMAFCADQAQ TAFTALLGRW PNAAFLITPI GFGLACLLAQ KVFPGSQGSG IPQVIAARRV IDPKSRLSLV SVRIAIGKIL VMILGLLCGA SIGREGPTVQ VGASIMGAFG YKAPPFIQPG LLLAGGAAGI AAAFNTPLAG IVFAIEELSR SFEARTSGLV LGCVIAAGLT SLAVVGDYTY FGSTDAILPL GPAWIIVPLC GVIGGLAGGL FSRILILFST GLRSTFVKRR PIIFAMICGL GVAACGFLSQ NSIYGTGYEQ AHAIVHGDDT LPATFSLFKF LASTFSSIAG IPGGVFAPSL SVGAGLGASI HHLFPVVPLG ALALLGMVGY LAGVVQTPIT SFVIVLEMTE DHAMIIPVMV TALIANAASR VICGDGLYHA LSRSFLEKLP KGHVLPEQTE GL
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