Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0549 |
Symbol | |
ID | 6200194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 606875 |
End bp | 609373 |
Gene Length | 2499 bp |
Protein Length | 832 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641704540 |
Product | TonB-dependent receptor |
Protein accession | YP_001831690 |
Protein GI | 182677544 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.6646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCGA AAGCCCCCAC GACTGAGCCT TTCCGTTTTC TTTTTCACAC GGAAAATTCA AAAGCGATTT CCGTTGGCAT GTTCCGCGGA GGCCATCCGG TCCATTTCAG CTGCTTAACA TTCTGCTTGT ATATCGCGAC AATGAGTGCG GCAAAGACGC AAGAGAGCTC CGCAAATGAA GCGACATTAC AGGATGTCGT CGTGACGGGT ATCGCGACAC CGGATACCGA TAAACAGGCG TTCTCGAAGC AACAAGCGAC ACAGCGTCAA TTCGTACCAT CCTCATCAAC GATCATCACC AAGCAGCAGC TCGACGCCGC TCAGGTCCGC AATGTGTTGG ACGCTCAAAG GCTACAGCCC GGTTTACGCA TCCGTTTTAC CAATGTTCGT AACCTATCTA TCAATATACG CGGCTTCGGC GCATCTTCCT CCAGCGCGAC CGACGGCATC TTCAACGGTG TTCCCGTCTA TATCGATGGC ATCCTGCAAC CACGTGTCGG TCAAGCGCTT TTCGATGTAC CGGATCTCGA CGGAATCGAG GTCCTGAAGG GACCACAAGC GACATCCGGC GGCATGGACA ATACTGGTGG CGTTGTTAAC CTCACGACGA CTCTACCGAG TTTCGCCACA CATGCATCGG CTGAAGTGTC CTATGGCCGA TATAATTGGG CACAATTCAA GGGCAGCCTC ACCGGTGCGG TAGGTGATAG CACCACGACC GCGTTTCGAC TGGCTGCGTT CGGTTCCGAC CGTGACGGTT ACGTTTCAAA TTACAACGGC GGGCAAAAGC TGAACGACTT CCACGACAAA GGCATGCGTG GCCAGATCTT GTGGCAACCA ACGGAAGATT TGACGGCGCG CTTCATCGTT GATTATGCGC AGATCAGTCA AGCCTGTTGC GGCCAGATTT ATAATGGCGG TATCGCCTAT TATGTAAACG GTCAACCAAT TCCCAATAAT TTTTATAATC GGGCGGCACG GATAGGGTTG ACGCCGCCTC CGGCAAACGC TCTTTCATCC TATATGACCG ATAATTTCGG TTATCAAAAC ACGTCTCAGG AAAGTTATGG CGCGGCGGCA ATCGTCGACT ACAATCTGCC AGATGGTTAC CATTTTAATT CTGTTACTTC TTTTCGGGGT TGGGATTTTC ATCCGCACAA TTTTGGCGAT GCCATTTACG TTGGCCTTCC GACTGATCTG ACGACTCGCA ACAACAGTCA CGTCACAGAG CGATCGGTGC AGCAGGAATT CAAGATTTCC ACCCCAAAAG GACAGCCCGT CGAAGGAACC GCCGGTCTCT TCTATCTCTA TGAACAGCTC TATAATTGGG GTCTCAGCGC ATATGGTTCG CAGGCAGGTC TCTGGTACGG CAAACCGACG GACTCAGCGG CCGTCAACAA TACGCTCAAC TATACCGCTC GCGAAAGCTA TGATAATCCG ACGACACACT ATATTGCGCC TTATGCGCAG GCGACATGGC ATGTCGACCC TGAATTCGAT CTGACTGCTG GTCTGCGTTA TTCCTATGTC TACAAGACCA CCCTTTATAG ACAGTGGCAA AACGCTTGGG ATACCTCTTA TTTGAGCCCT GCCGACCAGG CGGCATCCCA GGCCGCGCGC AATACCTTAC TCGGAAGCCC GCGACAATTT ACGGCTTCGA CGCATCAGGG GCTGATTTCG GCGCTCGCTT CGGCATCTTA CAAATTCGCT CCCGATGTGA TGGGTTATGT GACTTTCGCT CGCAGCGGTC GTCCCGGTGG TCCCAATCCC GCCAATCTGC CGGTCGGCGC ACCCACAACG GTCAAAGAGG AAGAAGTTGA GAATTACGAA GTCGGCCTAA AAAGCCAGTT TTTCGACCAA CGCCTGCTGG TCAATGTCGC TGCTTTCTAC ATGAACAATC ATAATTATAT CACTAACGTC ACCTCTCTGG TCGGCTCCAG CTTCTCCACC TATCTCGCCA ACGCGCAACG GGCGGTCTCC CGCGGTGTCG AGCTTGACGT CAGAGCGCAG CCGTTCGAAG GCCTCAATAC CTACGCTTCG ATGATTTATG ATAATGCCTA TTATGCCTCC TTTGACAACG GCCCGTGCCC CTTTGAAAGG TCCAATCAGA CGTCCTGCAA TTTCACGGGT CAACCTCTAT CACTGGTGCC GCGCTGGGCG GTGGCATTCG GTGGTGAATA CAGTCACCAC CTGGGTCTTG TGGAGCCATT TACAAAGCCG TTGATCGGAT ATGTCGGTGC CGACTTTAAC TGGCAAAGTT CTGTCTTCTC GAACACGACG AATTCCATCT ATTCGGTGAT CGGAGCTTAC GGCCTGCTCA ATGTGCATGG TGGTGTGAAG TTCGAGGATT CAAGCTGGGA CCTCTCCGTT TGGGGGCAGA ACGTCTTGAA TAAGCATTAT TTCATTACCC TCTCGGAAAC CAATCTCGGT ACCGGCATCG CTGCGGGCAA TGTCGGTTTG CCCATGACCG TCGGCTTTAC TCTCAGATGG CAGATGTAA
|
Protein sequence | MTSKAPTTEP FRFLFHTENS KAISVGMFRG GHPVHFSCLT FCLYIATMSA AKTQESSANE ATLQDVVVTG IATPDTDKQA FSKQQATQRQ FVPSSSTIIT KQQLDAAQVR NVLDAQRLQP GLRIRFTNVR NLSINIRGFG ASSSSATDGI FNGVPVYIDG ILQPRVGQAL FDVPDLDGIE VLKGPQATSG GMDNTGGVVN LTTTLPSFAT HASAEVSYGR YNWAQFKGSL TGAVGDSTTT AFRLAAFGSD RDGYVSNYNG GQKLNDFHDK GMRGQILWQP TEDLTARFIV DYAQISQACC GQIYNGGIAY YVNGQPIPNN FYNRAARIGL TPPPANALSS YMTDNFGYQN TSQESYGAAA IVDYNLPDGY HFNSVTSFRG WDFHPHNFGD AIYVGLPTDL TTRNNSHVTE RSVQQEFKIS TPKGQPVEGT AGLFYLYEQL YNWGLSAYGS QAGLWYGKPT DSAAVNNTLN YTARESYDNP TTHYIAPYAQ ATWHVDPEFD LTAGLRYSYV YKTTLYRQWQ NAWDTSYLSP ADQAASQAAR NTLLGSPRQF TASTHQGLIS ALASASYKFA PDVMGYVTFA RSGRPGGPNP ANLPVGAPTT VKEEEVENYE VGLKSQFFDQ RLLVNVAAFY MNNHNYITNV TSLVGSSFST YLANAQRAVS RGVELDVRAQ PFEGLNTYAS MIYDNAYYAS FDNGPCPFER SNQTSCNFTG QPLSLVPRWA VAFGGEYSHH LGLVEPFTKP LIGYVGADFN WQSSVFSNTT NSIYSVIGAY GLLNVHGGVK FEDSSWDLSV WGQNVLNKHY FITLSETNLG TGIAAGNVGL PMTVGFTLRW QM
|
| |