| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_11470 |
|---|
| Symbol | |
|---|
| ID | 8399695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 1294596 |
|---|
| End bp | 1295288 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644997218 |
|---|
| Product | haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| Protein accession | YP_003154583 |
|---|
| Protein GI | 257068328 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.241013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAGA GGAACCGACG GCGCACACCG CCCCGACCCA CGGTCGTCTT CGACTTCGGC
GGGGTGCTGA GCGCCGGGCA CGATCCGGTG CCCGACGTCC ACGAGCTCCT CGGAGGGGAT
GGCGAGACGC TGGGCGCGGC GCTCTGGGCC GAGCGGGACG CCTACGACCG CGGCGCGGTG
AGCCCGGCCG AGTACTGGGG CGCGGTCGCC GCGGCCGTCG GCGTCGAGCA GCTCTCCGCG
CAGGAGATCA GCGAGGTGCA GGAGGCGGAC AACCGCTACT TCCTGCGCCT GGACCCCGCC
GCGCGCGCCC TGCTCCACGA CCTGGCCCGC AACCGGGTGC GCCTGGCGCT GCTGTCCAAC
GCCTCGGAGG CCTTCGGCGA GGCGGTGCGG CGCGCGGATT GGTTCGAGGC GTTCACCCTC
GCGGTGATCT CCGGCGAGGA GCGGGCGGTC AAGCCCGAGC CGGAGATCTA CGAGGTGCTG
CTGGACGTGC TCGCCCACGA GACCGGGGGA GTGTCGATCC CCTCCTCGAT CCTCTTCTTC
GACGACCGCC GCGACAACGT CGAGGCCGCC CGCGCCCTCG GCATCGATGC GCACCTGTGG
CCCCGCAACG GCGAGCAGCA TCCCGAGGGC ACCGAGCACG GCGCGGAGAT CGCGCGCCGG
GTGCTGACCG AGCGGGGCAT CCCGCTGGAC TGA
|
|---|
| Protein sequence | MSKRNRRRTP PRPTVVFDFG GVLSAGHDPV PDVHELLGGD GETLGAALWA ERDAYDRGAV
SPAEYWGAVA AAVGVEQLSA QEISEVQEAD NRYFLRLDPA ARALLHDLAR NRVRLALLSN
ASEAFGEAVR RADWFEAFTL AVISGEERAV KPEPEIYEVL LDVLAHETGG VSIPSSILFF
DDRRDNVEAA RALGIDAHLW PRNGEQHPEG TEHGAEIARR VLTERGIPLD
|
|---|
| |