Gene Bfae_11210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_11210 
Symbol 
ID8399669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp1264163 
End bp1265275 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content75% 
IMG OID644997192 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_003154557 
Protein GI257068302 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01900] succinyl-diaminopimelate desuccinylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.331267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGCA TGAGCAGCCG GGCAGCCACC ACCCTCGACC CCCATGCCGA CATCGCCGAG 
CTCACCGCCG CGATCGTCGA CATCGAATCC GTCTCCGGGA ACGAGGAGGC GCTCGCCGAC 
GCGATCGAGC AGGCGCTGCG CACCCACGCC CCGCACCTCG AGGTGCTCCG CGACGGGGAC 
ACCGTCATCG CCCGCACCCA CCGGGGCCTG CCCCGGCGGG TGCTGCTGGC CGGCCACCTG 
GACACCGTGC CCGTCGCCGC GAACCTGCCC TCCTCGCGCC GGGTCCGCGA CGGCCGGGAG 
GAGCTGGTGG GCCGCGGCAG CTGCGACATG AAGGGCGGGG TCGCGGTGTT CCTCAAGCTC 
GCCGTCGAGG CGGTCGCGGC GCCGGTGGAC CTCACCTGGC TCTTCTACGA CCATGAGGAG 
GTCGCGGCGG CGCAGAACTC GCTCACCCGC CTCGCCGCCG AGCACCCGGA GCACCTCGCC 
GCGGATTTCG CCGTCCTCGG CGAGCCCACC TCGGCCGGCG TCGAGGGCGG CTGCAAGGGC 
ACCATGAAAC TCGAGGTGAC CGCCCGCGGC ACCGCCGCCC ACTCCGCCCG CGACTGGGTG 
GGGGACAATG CGATCCACGC TCTCGCGCCC GTGCTCGAGC GGCTCTCCGC CTACCGGCCG 
CGCCGCGCCG TGATCGACGG GCTCGAGTAC TGCGAATGCC TCAACGCCGT CGCGATCTCC 
GGCGGGATCG CCGGGAACGT GATCCCGGAC CGGGCGAGCG CCACCCTCAA CTACCGCTTC 
GCCCCGGACA CCACCGTCGC GCAGGCCGAG GCGCATGTGC GCGAGGTCCT CTCCGGGCTC 
GAGCTGGAGA TCGAGGTGAC CGACGCGGCC GGCGGCGCGC TGCCCGGCCT GGACCATGAC 
GCCGCCCGCG ACTTCCTCGC CGCTCTCGGC GGGGCGGTGC CCGTCGCCGC GAAGCAGGGC 
TGGACGGACG TGGCCCGCTT CGCGGCGCTC GGCACCCCGG CCGTGAACTT CGGCCCCGGG 
GACCCTCTGC TCGCCCACAC CGATGACGAG CACGTGCCGC TCGCCGACCT CGAGACCGCG 
CTCGCGGGGC TGCGGCGCGT CCTCAGCGCC TGA
 
Protein sequence
MTRMSSRAAT TLDPHADIAE LTAAIVDIES VSGNEEALAD AIEQALRTHA PHLEVLRDGD 
TVIARTHRGL PRRVLLAGHL DTVPVAANLP SSRRVRDGRE ELVGRGSCDM KGGVAVFLKL 
AVEAVAAPVD LTWLFYDHEE VAAAQNSLTR LAAEHPEHLA ADFAVLGEPT SAGVEGGCKG 
TMKLEVTARG TAAHSARDWV GDNAIHALAP VLERLSAYRP RRAVIDGLEY CECLNAVAIS 
GGIAGNVIPD RASATLNYRF APDTTVAQAE AHVREVLSGL ELEIEVTDAA GGALPGLDHD 
AARDFLAALG GAVPVAAKQG WTDVARFAAL GTPAVNFGPG DPLLAHTDDE HVPLADLETA 
LAGLRRVLSA