| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1044 |
|---|
| Symbol | |
|---|
| ID | 3752809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 1170317 |
|---|
| End bp | 1171420 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637765893 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_371802 |
|---|
| Protein GI | 78061894 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.093004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.206829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAATC CCGTACAAAT TCTCGGCGTG GACGGCAAAC CGCTGCCCCC GCGCCAGGGG
CGTGCGTCGA TGCTGTCCGG AGCGAGCCAG ACTCCCTACG ACGCTGCGAA CCTATACGGC
GCGCACGTTG AAGACTGGAA TCCGTACCTG TGGTCTCCCG ATGGGGAGAT CAACATGTAC
CACGACCGGA TCACGGCCCG TGCGCGCGAT CTGGTCAGAA ATGACGGGTG GGCGACGGCC
GCAGTGATGC GGACGCTCGA CAACGTCATC GGCCCGGATT TCCGGCCGAT CTCGAAGCCG
GACCATGTCG CGCTGCGCGC GCTGACCGGA AACAAGGCGT TCGACCACGT CTGGGCCGAT
GAATTCGGCC AGCAGGTCGA GGCGAATTAC CGTGCATGGG CGCACGATCC CGGCTTCTAC
TGCGACGCCG AACGGATGCT GCCTATGCCC GGGCTGTTCC AGGTCGCTTT CCGACACAAG
ATCGTCGACG GCGACGGCCT TGGCCAGATG CATTACCTGC CTCAACGGGT CAGTGTCGGA
CGTGCGCGCT ACGCGACCGC ACACCAGGTG ATCGACCCGG ATCTCGAGGC GCAATATCGG
CTGCCGCGTG GTCTTCTCGA TAGCGTATGG ACAGTCGAAT CTGGGCGTGG CGCGAACATG
CTTTCGCCGA AGGGCGCGAT GGGGCATTTC CAGTTCATGC CGGCAACCGC GAAGCAATAT
GGCCTGACGG ATCCGAACGA TCTGCAGCAG TCGGCGACGG CCGCGGCCCG GATGTATAGC
GATTTACTGA AAGCGAACGG CGGTGATCTT GAGCGCGCGC TGGCCGGGTA CAACTGGGGG
CAGGGGAACC TGAATCGCGC TGGGCTTGGC GCTGCGCCGA ACGAGACTCG GAAATACATC
GCTGCGGTCG AAGCGAATAT GGCCGGATCC AGCCCGACGT CAGGCGGTGC GGTGCCATCA
GGCGCCGCCG GCGCTGGTGC GCCGCAATCG ATGCACGTCA CGCTCGACAT GAAGAACGTG
CCGCAAGGGA TGCGGGCCGA GGCGAAGACG GCCGACGGGA ACTATTTGCC TACGCGAGTC
GAATACCGGC TTGACGGAAT TTAA
|
|---|
| Protein sequence | MDNPVQILGV DGKPLPPRQG RASMLSGASQ TPYDAANLYG AHVEDWNPYL WSPDGEINMY
HDRITARARD LVRNDGWATA AVMRTLDNVI GPDFRPISKP DHVALRALTG NKAFDHVWAD
EFGQQVEANY RAWAHDPGFY CDAERMLPMP GLFQVAFRHK IVDGDGLGQM HYLPQRVSVG
RARYATAHQV IDPDLEAQYR LPRGLLDSVW TVESGRGANM LSPKGAMGHF QFMPATAKQY
GLTDPNDLQQ SATAAARMYS DLLKANGGDL ERALAGYNWG QGNLNRAGLG AAPNETRKYI
AAVEANMAGS SPTSGGAVPS GAAGAGAPQS MHVTLDMKNV PQGMRAEAKT ADGNYLPTRV
EYRLDGI
|
|---|
| |