| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0938 |
|---|
| Symbol | |
|---|
| ID | 3752703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 1051372 |
|---|
| End bp | 1052580 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637765787 |
|---|
| Product | outer membrane protein (porin) |
|---|
| Protein accession | YP_371696 |
|---|
| Protein GI | 78061788 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.331249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG GACGACGACT GGCCGCGGCT GCGGCGACGC TGGGTTGCAT GCACGCACAC
GCGCAGACCA CGGGCAGCGT GACGCTGTAC GGCACCGTGG ACACCGGCAT CATCTACTCG
ACGAACCAGC AGTTCACGCG CGCCGACGGC AGCACCGGCG GCGGCCATGC GTGGCAGATG
GGCGGCGGCA ACCTCGTGCC GTCGCGCTTC GGCTTCCAGG GCGCCGAGCC GCTCGGCGGC
GGGCTCAATG CGGTGTTCAC GCTCGAGCAG CAGTTCCTGT CGGCGAACGG GCAGGCGCTG
CAGGGCGGCA CGGCCTTCAG CCGGCAGGCG TGGGTCGGGC TGCGCCAGGA CGGAATCGGC
ACGCTCGGCC TTGGCCGTCA ATACGACTCG TACACCGACA TGCTCGGCGC GTACGTGTCG
AGCAACAACT GGGCGACACC GTACGGCTCG CACCTCGGCG ACGTCGACAA CCTGAACGCC
GCATTCAACT TCAACAACGC GGTGAAGTTC ACCAGCGCCG ATTTCAACGG CCTCACGTTC
GGCGGCACGT TCAGCTTCGG CGGGCAGGCT GGCGACTTCT CCGCGAAGCG CGGCTATGCG
GTGGCCGCGA CGTACACGCG TGCGCCGGTC GCGTTCTCGG TCGGCTACCT CGACCTGCAC
CAGCCGCTCG ACGCGGCGCT CGGCGGCGCG AGCGGCTATA TCGGCGATTT CGCGTGCAGC
AACCCGGGCG CGATGTACTG CCTGCTGCAG GACGCCGGCT CGATGCGCGC GTTCGGTGCG
GGCGGATCGG TCACGTTCGG CGATGCGACG ATCGCGCTCA CCTACACGCA TACGCGCCTC
GGCGACAGCC GCTATTTCTC GACCACCGCG CAGCCGCGCA CGCAGGCGTT CACGTTCGAC
ATCGGCGAAT TGAACGCCAC CTACATGTTC ACGCCGGCGC TGCAGGGCGG CGTGGCCTAT
ATCTTCAACG CCGCGCATAC CGACGGGCGC GGCACGACGC GGTTCCACCA GGTGAACGTC
GGCACGAACT ACAGCCTGTC GAAGCGCACG GCGCTGTATG CGGTCGCGAT CGGCCAGATC
GCGAGCGGGA AGGGGCTCGG CACCGACGCG GACGGCAACG CGGTGAACTA CGCGCAGATC
CCGGTGCTCG CGAACAGCAA CTCGAGCCGG CAACTGGCGG TGATGGCCGG GATTCGCGTG
AACTTCTGA
|
|---|
| Protein sequence | MKIGRRLAAA AATLGCMHAH AQTTGSVTLY GTVDTGIIYS TNQQFTRADG STGGGHAWQM
GGGNLVPSRF GFQGAEPLGG GLNAVFTLEQ QFLSANGQAL QGGTAFSRQA WVGLRQDGIG
TLGLGRQYDS YTDMLGAYVS SNNWATPYGS HLGDVDNLNA AFNFNNAVKF TSADFNGLTF
GGTFSFGGQA GDFSAKRGYA VAATYTRAPV AFSVGYLDLH QPLDAALGGA SGYIGDFACS
NPGAMYCLLQ DAGSMRAFGA GGSVTFGDAT IALTYTHTRL GDSRYFSTTA QPRTQAFTFD
IGELNATYMF TPALQGGVAY IFNAAHTDGR GTTRFHQVNV GTNYSLSKRT ALYAVAIGQI
ASGKGLGTDA DGNAVNYAQI PVLANSNSSR QLAVMAGIRV NF
|
|---|
| |