Gene Bcep18194_A3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3400 
Symbol 
ID3748568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp258485 
End bp259651 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID637761665 
ProductABC efflux pump, inner membrane subunit 
Protein accessionYP_367646 
Protein GI78064877 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.089365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.767556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCC CGCTCAACTA CATCGCGCGC AACCTGTGGA CCCGGCGGCT CACCACCGCG 
CTGACCGCCG GCGGGATGGC GCTCGTGATC TTCGTGTTCG CGACCGTGCA GATGCTCGAC
GCGGGGCTCA CGAAGACGCT CGTGTCGACC GGCGAGCCCG ACAACGCGGT GGTGATCCGC
AAGGGCGCCG AAACCGAGAT CCAGAGCTCG ATCGACCACC AGCAGGCCAA TGCGCTCGAG
ATGCACCCGG CCGTCGCGCT CGGCCCCGAC GGCCGGCCGC TCGTGTCGAA GGAAGCGGTC
GTGCTGATCT CGCTGGTGAA GACCTCGTCC GGCAAGCCGT CGAACGTCGT GATCCGCGGC
GTGTCGCCGG CCGGCCTCGC GCTGCGCCCG CACGTGAAGC TCGTCGGGGG CCGCATGTTC
ACGCCCGGCT CGTCGGAAAT CATCGTCGGC AGCGCGATCG CGAAAGGGTT CAGCGGCACG
CAGCTCGGCG ACAGCCTGCA TTTCGCGCAG CGCGACTGGA CCATCGTCGG CATCTTCGAC
GCGGGCGGCA GCGGCTTCGA TTCGGAGATC TGGGGCGACG TCGACCAGCT GATGCAGTCG
TTCCGGCGCA CCAGCTATTC GTCGATGGTG CTGCGCATCC CGAGCGCCGA CGGCTTCGCA
CGCTTCAAGG CCGACATCGA CGTCGACCCG CGGCTCACCG ACGAGGCGAA ACGCGAGCAG
ACCTTCTACG GCGACCAGTC GAAGGCGCTG TCGACGTTCA TCAACATCCT CGGCATCACG
CTGTCGACGA TCTTCTCGAT CGCCGCGATG ATCGGCGCGA TGATCACGAT GTATGCGTCG
GTCGCGAACC GCGTCGCCGA GATCGGCACG CTGCGCGCGC TCGGCTTCAA GCGCCTGAAC
GTGCTCGCCG CGTTCCTGCT GGAAGCGCTG CTGCTCGGCT TCGTCGGCGG CGTCGCGGGG
CTCGCGTGTG CGTCGCTGAT GCAGTTCGCG TCGTTCTCGA CGACCAACTT CCAGACCTTC
GCGGACCTGT CGTTCCGCTT CGTGCTGACG CCCGCGATCG TCGTGAAGAC GCTGCTGTTC
TCGCTCGTGA TGGGGCTGGT CGGCGGGTTC CTGCCGGCGA TGCGCGCCGC GCGGCTGAAG
ATCGTCGACG CGCTGCGCGC ACAGTGA
 
Protein sequence
MAIPLNYIAR NLWTRRLTTA LTAGGMALVI FVFATVQMLD AGLTKTLVST GEPDNAVVIR 
KGAETEIQSS IDHQQANALE MHPAVALGPD GRPLVSKEAV VLISLVKTSS GKPSNVVIRG
VSPAGLALRP HVKLVGGRMF TPGSSEIIVG SAIAKGFSGT QLGDSLHFAQ RDWTIVGIFD
AGGSGFDSEI WGDVDQLMQS FRRTSYSSMV LRIPSADGFA RFKADIDVDP RLTDEAKREQ
TFYGDQSKAL STFINILGIT LSTIFSIAAM IGAMITMYAS VANRVAEIGT LRALGFKRLN
VLAAFLLEAL LLGFVGGVAG LACASLMQFA SFSTTNFQTF ADLSFRFVLT PAIVVKTLLF
SLVMGLVGGF LPAMRAARLK IVDALRAQ