Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_7040 |
Symbol | |
ID | 6125949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 1162404 |
End bp | 1163375 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641648044 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001774636 |
Protein GI | 170735522 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.165812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.300758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA CGCCCCGCTC GACCCGAGCT TCGTTACTGT CGCCGCGCGA CCGGAAGCGC CTGGCGACGC TGCTGCGCAC ACTGGCGCCC GACGAGGGCT ACAACCTGAC CGCGCTGCCG AGCGTGCGCA TCCTGCGCTC GAACCGCGCG CTGTCGCGCA CGCCAGTGCT GTACGACCCG GGTATCGTGA TCGTGTGCCA GGGATCGAAG CGCGGGTACT TCGGCGGCGA GCGCTATTTG TACGACGAGC ACCATTACCT GGCCGTCTCC GTGCCCGTGC CGTTCAGCAT GGAAACCGAC GCCACGCCGG AGCGCCCGCT GCTCGCGCTG TACCTGCACC TCGATTTCAC GCTGGCCGCC GAACTCGCCG CGCAGATCGA CCGAGCCGGC CTCGCGGAAA CCGTGCAGGC GCCGAAGAGC ATGATGTCGA CGCCGATGGA TGAAGCGATG CATGCGTCGG TGCTGCGTTT CGTCGAGGCG ATGCAGCGGC CGCTCGACGC CGCGGTGCTC GGCCCGGCGC TGCTTCGCGA GCTGTATTTC CGCGTGCTGA CCGGCGCGCA GGGCAACGCG ATGCGCAACG CACTGGCGAT GCGCGGGCAA TTCGGCCGGA TCGGGCGCTC GTTGCGCATG ATTCATACCG ATTACGCACG GCCGCTCGAC GTGTCGCAAC TGGCCGAAGA AGCCGGCATG AGCGTGCCGA GCTTTCACAG TCACTTCAAG GCGATCACGC AGGTGTCGCC GATGCAGTAC CTGAAGTCGA CGCGCCTGCA TCAGGCGCGG CTATTGATGG TGCGTCAGGA CCTGACGGCG GAAGCGGCCG GCTACGCGGT CGGCTATACG AGCCCGTCGC AGTTCAGCCG GGAATTCAAG CGCCTGTTCG GCTTGACGCC AGCGAAGGAA ACGCAGCGCA TGCGCGCGAG CTTCGCGATT CCGCAGGCGT TCGACGATGC GGTGTTCGTG TCGTCGCATT GA
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Protein sequence | MSTTPRSTRA SLLSPRDRKR LATLLRTLAP DEGYNLTALP SVRILRSNRA LSRTPVLYDP GIVIVCQGSK RGYFGGERYL YDEHHYLAVS VPVPFSMETD ATPERPLLAL YLHLDFTLAA ELAAQIDRAG LAETVQAPKS MMSTPMDEAM HASVLRFVEA MQRPLDAAVL GPALLRELYF RVLTGAQGNA MRNALAMRGQ FGRIGRSLRM IHTDYARPLD VSQLAEEAGM SVPSFHSHFK AITQVSPMQY LKSTRLHQAR LLMVRQDLTA EAAGYAVGYT SPSQFSREFK RLFGLTPAKE TQRMRASFAI PQAFDDAVFV SSH
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