Gene Bcenmc03_7040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_7040 
Symbol 
ID6125949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp1162404 
End bp1163375 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content67% 
IMG OID641648044 
ProductAraC family transcriptional regulator 
Protein accessionYP_001774636 
Protein GI170735522 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.165812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.300758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CGCCCCGCTC GACCCGAGCT TCGTTACTGT CGCCGCGCGA CCGGAAGCGC 
CTGGCGACGC TGCTGCGCAC ACTGGCGCCC GACGAGGGCT ACAACCTGAC CGCGCTGCCG
AGCGTGCGCA TCCTGCGCTC GAACCGCGCG CTGTCGCGCA CGCCAGTGCT GTACGACCCG
GGTATCGTGA TCGTGTGCCA GGGATCGAAG CGCGGGTACT TCGGCGGCGA GCGCTATTTG
TACGACGAGC ACCATTACCT GGCCGTCTCC GTGCCCGTGC CGTTCAGCAT GGAAACCGAC
GCCACGCCGG AGCGCCCGCT GCTCGCGCTG TACCTGCACC TCGATTTCAC GCTGGCCGCC
GAACTCGCCG CGCAGATCGA CCGAGCCGGC CTCGCGGAAA CCGTGCAGGC GCCGAAGAGC
ATGATGTCGA CGCCGATGGA TGAAGCGATG CATGCGTCGG TGCTGCGTTT CGTCGAGGCG
ATGCAGCGGC CGCTCGACGC CGCGGTGCTC GGCCCGGCGC TGCTTCGCGA GCTGTATTTC
CGCGTGCTGA CCGGCGCGCA GGGCAACGCG ATGCGCAACG CACTGGCGAT GCGCGGGCAA
TTCGGCCGGA TCGGGCGCTC GTTGCGCATG ATTCATACCG ATTACGCACG GCCGCTCGAC
GTGTCGCAAC TGGCCGAAGA AGCCGGCATG AGCGTGCCGA GCTTTCACAG TCACTTCAAG
GCGATCACGC AGGTGTCGCC GATGCAGTAC CTGAAGTCGA CGCGCCTGCA TCAGGCGCGG
CTATTGATGG TGCGTCAGGA CCTGACGGCG GAAGCGGCCG GCTACGCGGT CGGCTATACG
AGCCCGTCGC AGTTCAGCCG GGAATTCAAG CGCCTGTTCG GCTTGACGCC AGCGAAGGAA
ACGCAGCGCA TGCGCGCGAG CTTCGCGATT CCGCAGGCGT TCGACGATGC GGTGTTCGTG
TCGTCGCATT GA
 
Protein sequence
MSTTPRSTRA SLLSPRDRKR LATLLRTLAP DEGYNLTALP SVRILRSNRA LSRTPVLYDP 
GIVIVCQGSK RGYFGGERYL YDEHHYLAVS VPVPFSMETD ATPERPLLAL YLHLDFTLAA
ELAAQIDRAG LAETVQAPKS MMSTPMDEAM HASVLRFVEA MQRPLDAAVL GPALLRELYF
RVLTGAQGNA MRNALAMRGQ FGRIGRSLRM IHTDYARPLD VSQLAEEAGM SVPSFHSHFK
AITQVSPMQY LKSTRLHQAR LLMVRQDLTA EAAGYAVGYT SPSQFSREFK RLFGLTPAKE
TQRMRASFAI PQAFDDAVFV SSH