Gene Bcenmc03_6416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6416 
Symbol 
ID6125339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp451846 
End bp452769 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID641647429 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001774026 
Protein GI170734912 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGC GGTCCTCTAA CCTCATTGGC TGGGAAACAC TCAACATGTC CAGAACCATT 
CTGATCACCG GCGCCAGCAG CGGCTTCGGC CGCGACACCG CGGAAACGCT CTCACGTGCC
GGGCACCGGG TATTCGCGTC GATGCGTGAC GTCGCCGGCC GCAACCGGCC ACAGGCCGAT
GCGCTCCGGG CGAGCGACGT GCAGGTCGTC GAACTCGACG TGACGGACGA TGCGTCTGTC
GAGCGCGGCG TCGCTTCCGT GCTGGAACAT GCCGGGCGCC TCGATGTCCT GATCAATAAC
GCTGGTATCG GTTCGGCCGG CGTTTCCGAG GCGTTCACGA CGAAGCAGGT ACAGGCACTC
TTCGACGTGA ACGTATTCGG CATCCAGCGC ATGTCGAGAG CGGTATTGCC GACCTTCAGA
AAGCAGGGTG AAGGCCTGAT CGTGAACATC GGCTCGATAC TCGGCCGCGT GACGTTTCCG
TTCTTCGGTC TGTACGGTGC ATCGAAGTTC GCGATCGAAG CGTTGACCGA CAGCTACCGC
TACGAATTGT CGACGTTGGG CATCGACGTC GTTCTCGTTC AACCCAGCAA CTATCCGACG
AATATCTTCG CCAGCGCGCA GCGGCCCGCC GACGCCGCGC GCGTGCCCGG CTACGGTGAA
GCCGGTGCGA TTCCGGACAA GATGGTGGAG ACGTTGATGG CGTTGTTCGC GAGCGACCAC
GCGCCGGACC CGCACGACGT CGCCGAAGCC ATCGTGCAGC TCGTCGAGCG GGCACCGGGC
ACGCGTCCCG CACGTTGGGT CGTGGGTCAG TCATTCGGCG CCGACGCCCT CAACGCTCAA
GCAGCAGCGA TTCAGGCGCA GACACTGGAA AGCCTCGGGC TCGCGCACCT CGCCGGGCCG
CAAGGACAAT CCGCGGCGGC GTGA
 
Protein sequence
MRLRSSNLIG WETLNMSRTI LITGASSGFG RDTAETLSRA GHRVFASMRD VAGRNRPQAD 
ALRASDVQVV ELDVTDDASV ERGVASVLEH AGRLDVLINN AGIGSAGVSE AFTTKQVQAL
FDVNVFGIQR MSRAVLPTFR KQGEGLIVNI GSILGRVTFP FFGLYGASKF AIEALTDSYR
YELSTLGIDV VLVQPSNYPT NIFASAQRPA DAARVPGYGE AGAIPDKMVE TLMALFASDH
APDPHDVAEA IVQLVERAPG TRPARWVVGQ SFGADALNAQ AAAIQAQTLE SLGLAHLAGP
QGQSAAA