Gene Bcenmc03_6109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6109 
Symbol 
ID6125084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp100988 
End bp101776 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content71% 
IMG OID641647128 
ProductTonB family protein 
Protein accessionYP_001773725 
Protein GI170734611 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTG ATTCCTTGCC CGCACGCCCC TGGGACGACA TCGCCGTGCA CGAGAACACG 
TCCCAGGCGC CCCATGCGCG CACCCGCCGC GTCGCGTGTG CCGCGGGTGT ACTGCTTGCA
CACGCGCTCG GGCTGTACGT TGCGGTTCAC GAAAGCGCGG TGACGCTCAG GCTCGAAGCC
GGGCGTCCCG TGGGCGGCAC GGTGCAGGTG CAACTGGTCG CCGCGCCGGC GCCGCGGCCC
GCACCGACAC CGCCTGCGCC GCCGAAGCCA CGCACCGAGC CGCCGAAACC CGTGGCACCG
GCGAAGCCGG AAAAGGCGCA CGTGCTGGCG TCGCACGCGC CGAGCCCGCG CACGGTGGAA
GCGGCGCCCC AGGAGACGCC GAAACCCGCC GAAACGCGGC CGGTCGCGCC GGTGCCCGCA
CCGCATCCCG CACCTGAAGC AGCGCCGGCC CAACCTGTCG CGCAACCCGC GCCGGGGCCG
AACCTGCTGG ACGCGCCGAA GCAAATCAGC GCGGGCGAGT TGAAGCAGTT GGGATGCCAG
ATGCCGCGAC CCGACTACCC GGCGAAAGCG CGCCGGCTGC AACAGGAAGG CACCGTGGTC
GTGCATCTGA GTATCGGTAC CGACGGCGCG GTGACGTCCG CACGCGTGGC GCAGAGCAGC
GGTTCAGCGC TGCTCGACGC GGCCGCAGTC GCTGCGATCC GTGCCGGGCG CTGTCATCCG
TACGAGACCG CGGGCATCGC ACGCTCGGTC GAAGCTACCC AACCCATCGC ATTCAACCTG
AACGACTGA
 
Protein sequence
MTSDSLPARP WDDIAVHENT SQAPHARTRR VACAAGVLLA HALGLYVAVH ESAVTLRLEA 
GRPVGGTVQV QLVAAPAPRP APTPPAPPKP RTEPPKPVAP AKPEKAHVLA SHAPSPRTVE
AAPQETPKPA ETRPVAPVPA PHPAPEAAPA QPVAQPAPGP NLLDAPKQIS AGELKQLGCQ
MPRPDYPAKA RRLQQEGTVV VHLSIGTDGA VTSARVAQSS GSALLDAAAV AAIRAGRCHP
YETAGIARSV EATQPIAFNL ND