| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5907 |
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| Symbol | |
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| ID | 6128711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 3101603 |
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| End bp | 3102706 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641652991 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001779518 |
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| Protein GI | 170738258 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.39287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0582913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGTC ACCCGTCCGA ACCGCGCGAC CTGACCCAGG AGATCCTCGA CCTCGTCGAT
CAGCGCCGCT TCTTCACCGA CCTGCACATC GAGCAGGACC GGCCCATCAT GATCAAGACA
CCGCGCGGCT GGGTCGAGAC CGAAGGCGGT CCGATCATGC TCGACGAGAT GGCGCCGATG
CTCGATGCCG TCGACGACGA CTGGGACAAC CGCCTGCGCG ACGGCGCGAT CGATCGCCAG
TTCGTGCTGA CCGGCTGCCG CCTGCGCGCG CACGTCTACC GCACGTCGAA CGGTCGCAAG
ACCGTCATCT CGATCCGCCG CCTGCCGCTC GCCCCGCTGC CGCTCGACAA GCTCGGCCTG
CCCGCGTACA TCCGCTCCAC GATCGAGACC GCGAGCATGG GGCTCGTGCT CGTGACCGGC
GTCACGGGCT CGGGCAAGAC GACCACGATC GCGTCGCTGC TCGACCACCT CAATCGCACC
CGCAACTGCC ATATCGTCAC GATCGAGCAG CCGATCGAAT ACGCGCTCGA CAGCCACCAG
TCGATCATTT CCCAGCGCGA GGTCCCGACC GACACCCGCA GCTTCTCCGC CGGCATGCGC
GAAGTGCTGC GCGAGCGCGC CGACGTGATC ATGGTCGGCG AGATCCGCGA CATCGAAACC
GCCGAGGCCG TGCTGCAGGC CAGCGAATCG GGGCACCTCG TATTCGCGAC CATGCACACC
GGCAGCGCAC TCACCACCGT CACGCGCCTG CTCTCGTTCT TTCCCGCCGA GCAGCGCGAA
CGTCACGCGG CATCGCTCGC GAACGCGCTG ATCGGCGTGA TCTGCCAGAG CCTCGTGCCC
AGCGAAAGCG GCGATCAGCT CGTGCTCGCC AGCGAGCTGC TGTTCAACCA CAATCAGCAG
ATCAGCGCGT TCCTCACCGA TCCATCGAAG ATCCCGATGC TCGCGGAATT CGTCCGGCGC
AAGGAGGACA ACATGTCCCG CTCGCTCAAC GAAAGCCTCG CGCAGCTCGT CGCCCGGAAT
GCCATCACCG CGCGCGACGC ACTGCGTGCG ACCTACAACC GCATCGAACT CAACGAAATG
CTTCAGCAAA CCGGTCTGCG TTGA
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| Protein sequence | MHSHPSEPRD LTQEILDLVD QRRFFTDLHI EQDRPIMIKT PRGWVETEGG PIMLDEMAPM
LDAVDDDWDN RLRDGAIDRQ FVLTGCRLRA HVYRTSNGRK TVISIRRLPL APLPLDKLGL
PAYIRSTIET ASMGLVLVTG VTGSGKTTTI ASLLDHLNRT RNCHIVTIEQ PIEYALDSHQ
SIISQREVPT DTRSFSAGMR EVLRERADVI MVGEIRDIET AEAVLQASES GHLVFATMHT
GSALTTVTRL LSFFPAEQRE RHAASLANAL IGVICQSLVP SESGDQLVLA SELLFNHNQQ
ISAFLTDPSK IPMLAEFVRR KEDNMSRSLN ESLAQLVARN AITARDALRA TYNRIELNEM
LQQTGLR
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