Gene Bcenmc03_5380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5380 
Symbol 
ID6128190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2505353 
End bp2506090 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID641652470 
Producthypothetical protein 
Protein accessionYP_001778997 
Protein GI170737737 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.11542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.153566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTC TCATCATCAT CGCCGGCCTC TGGGCCGGCC TGCAGAACGC CCTCGCGGGC 
GGCGGTTCGT TCGTCACGCT GCCCGCGCTG ATCGTGTCGG GGATGTCCCC GCTCGCGGCC
AACATCACGT CGACGGTCGC CCTGTTCCCC GGCCAGGTGA CGACGGGCTG GGCGAGCCGC
AACATGGTGA GCGGCGTGGG CAGGCTGCCG TTTCGCGCCC TGTTCGCGAT CAGCGTGGCC
GGCGGCGCAC TTGGCGGCCT GCTGCTGCTG AAAACGCCGT CGTCGATCTT TTCGCATCTG
GTGCCGTGGC TCGTGCTGTT CGCGACGATC GTGTTCGCGT GGGGCAGTTT CTTCCGCAAG
CCGGGCGCCG GCGCGCAACA TCTCGGCCCC GTCGCGGCCG GGGTCTCCCA GTTCCTGATC
GCGATCTACG GCGGCTACTT CGGCGGCGGC ATCGGGTTCC TGATGATGGC CGCGCTGACG
ATGGCCGGCC TGCCGCCGCG TCACGCGATG TCGACCAAGA ACGCGCTCGC GGGCGTGATG
AACGCGTCGG CGGTCGTGCT GTTCGTCACC TCGCCGCACC TGCACTGGCG TGAGGCGATC
GCGCTCGGCG GCGGCGCAAT CGTCGGCGGC CTGCTCGGCG CGTGGGCGCT GCATCGCGTG
AACGAACGCG TGCTGCGCAT CGCGATCGTC TGCATCGGCG CGCTGCTGAC CATCGGGTTG
TTCGTCAAAC CGATCTGA
 
Protein sequence
MLALIIIAGL WAGLQNALAG GGSFVTLPAL IVSGMSPLAA NITSTVALFP GQVTTGWASR 
NMVSGVGRLP FRALFAISVA GGALGGLLLL KTPSSIFSHL VPWLVLFATI VFAWGSFFRK
PGAGAQHLGP VAAGVSQFLI AIYGGYFGGG IGFLMMAALT MAGLPPRHAM STKNALAGVM
NASAVVLFVT SPHLHWREAI ALGGGAIVGG LLGAWALHRV NERVLRIAIV CIGALLTIGL
FVKPI