Gene Bcenmc03_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4112 
Symbol 
ID6126945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1052648 
End bp1053658 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content68% 
IMG OID641651220 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_001777753 
Protein GI170736493 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCA TGTTCGTCGA ACTCGCGTTC ATGCTGATCG TCATCCTCGT CGCGGCCGAA 
GTCTTCACCA ATGCGCTCGA ACATCTCGGC GAACGCCTGA AGATTTCCGA AGGCGTGACC
GGCTCGCTGT TCGCGGCCGT CGGCACCGCG CTGCCCGAAA CGATGGTGCC GCTGCTCGCG
CTGGCCGGCG GCACGTCGAG TCAGGCCGTC AACGAGGAGA TCGGCGTCGG CGCGATTCTC
GGCGCGCCGC TGATGCTCGC GACGCTCACC ACGTTCCTGA TGGCGCTCGC CGTGATCCGC
TCGCGCGGGC CGCGCGGCAC GATCGCGCCC GAACGCACGG GCTTCGTGCG CGACATGAAC
ACCTTCCTCG CCGCCTTCTC GCTGGCGACC GTCGCGATGT TCGTCCCGCA TCACAACTGG
GCCGTGCGCG CGCTGCTCGC CGCGATGCTG GTCGGTCTCT ACGTGATGTA CGTCGTGCTG
ACGTTCCGCG CGTCGACGCG GCTCGTCGAT GCCGGGCACG GCACCGAGGC GCCGCACGCG
ATGTTGCTCT CCCGCATCGG CCTGCCGACC AACCTGGCGA CGATCGTGCT GCAACTGCTG
ATCGGCGTCG CGCTGCTGGT CGGCGGCGCG AAGGGCTTCA TTCACGGCGT GGAAGGCGTG
TCGCACGTGC TCGGCGTGTC GGCGCTGCTG CTGTCGCTGA TCATCGTGCC GATCGCGACG
GAACTGCCGG AGAAGGTCAA CAGCGTGCTG TGGATTCGCC GCGGGAAAGA CACGCTGGCG
TTCGGCAACA TCACCGGCGC GATGGTGTTC CAGGGCACGC TGCTGCCGGC GATCGGCATC
ATGCTGACGC CGTGGGAGCC GCGCCCCGAA GTGCTGACCG GCGTGATCAT CACGCTCGCG
GCGGCGGTCT GGCTGCGCGT CAATGCACGC ACGCGCGGGC TCACGATCTG GGCGTTGCTC
GCGAACGGCG CGGGTTATGC GGGATATCTG GCGGTGACGC TGGCGCGCTA A
 
Protein sequence
MTFMFVELAF MLIVILVAAE VFTNALEHLG ERLKISEGVT GSLFAAVGTA LPETMVPLLA 
LAGGTSSQAV NEEIGVGAIL GAPLMLATLT TFLMALAVIR SRGPRGTIAP ERTGFVRDMN
TFLAAFSLAT VAMFVPHHNW AVRALLAAML VGLYVMYVVL TFRASTRLVD AGHGTEAPHA
MLLSRIGLPT NLATIVLQLL IGVALLVGGA KGFIHGVEGV SHVLGVSALL LSLIIVPIAT
ELPEKVNSVL WIRRGKDTLA FGNITGAMVF QGTLLPAIGI MLTPWEPRPE VLTGVIITLA
AAVWLRVNAR TRGLTIWALL ANGAGYAGYL AVTLAR