Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3891 |
Symbol | |
ID | 6126724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 815915 |
End bp | 816832 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641650999 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001777532 |
Protein GI | 170736272 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.314742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.132364 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATACCC GCGATCTGGA GTACCTGCTG GCCGTGGAGC GGCACGGCAG CATCGGCAAG GCGGCCGACG CGCTGGGGCT GTCGCAGCCC GCGCTGACCA AGGCCGTGCA GCGGCTGGAG GCGCAGGTCG GCGTGACGCT GTTCGAGCGC ACCGCGAACG GGATGACGCC GACGCCCGCC GGCGCGCGCT TCGTCGCCCG CGCGCAGCGG ATCGCGCTCG AATTCGACGA TGCGATGCAG GAGATGCGTG CGATCCGCGG CGGCGAACAG GGTGTCGTGC GGGTCGGCTA CTCGCCGACC GTGCCCAATG CGTTCGTGCT CGGCGCGTGC CGGCAACTGA TCCGCGAGCG GCCGGCAGCG CGGCTGCGGC TGCGCTGCCG GCTCGCCCGC GAGCTGCTCG ACCTGCTCGC GGCCGGCGAG CTCGACCTGG TGGTGGCGCC CGAGCCGCAG CAGCCGGACC CGACGCTCGA CACCATCGTG CTGTTCGACG ACCGGCTCAC GGTGCTCGCC GATGCCGACC ACCCGCTGCA GCGCAAGCGC GCGCTCACGC TCGCGGATCT CGCCGACCAG GAATGGCTGC TGCCGGAGAC GACGATCCCG GTGCGGCACC GGATCGACGA CGCGTTCCGC GCGCGCGGGC TGCCGGCGCC GCGCCTGCGT GTCGAGACCG ATTTCGGCAA CACGTCGCTG CTGCAGTTGC TGCGCGGCAC GTCGCTGCTG TGCGTCGGCG GCGCCGACGC GCTCGGCCAG GTGACCGGAC TGCGCGCGCT CGACCTGCGC GCCGGCGAAC TCGAACTGGA CCGCCGCATC GGCGCGATGC ACCGCGCGGG CGCATACGTG CCGCCGCTCG CGCAGCGGAT GATCGCGCTG CTGCGGGAAA GCGCCGCATC GCGCCCCGAC CATCATTTGC GGGAGTGA
|
Protein sequence | MDTRDLEYLL AVERHGSIGK AADALGLSQP ALTKAVQRLE AQVGVTLFER TANGMTPTPA GARFVARAQR IALEFDDAMQ EMRAIRGGEQ GVVRVGYSPT VPNAFVLGAC RQLIRERPAA RLRLRCRLAR ELLDLLAAGE LDLVVAPEPQ QPDPTLDTIV LFDDRLTVLA DADHPLQRKR ALTLADLADQ EWLLPETTIP VRHRIDDAFR ARGLPAPRLR VETDFGNTSL LQLLRGTSLL CVGGADALGQ VTGLRALDLR AGELELDRRI GAMHRAGAYV PPLAQRMIAL LRESAASRPD HHLRE
|
| |