Gene Bcenmc03_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3855 
Symbol 
ID6126688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp775274 
End bp775915 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID641650963 
ProductTetR family transcriptional regulator 
Protein accessionYP_001777496 
Protein GI170736236 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.898863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.650046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAG CACTCGAAAC GGAAAAAAGG GGCCGGGCGT ATGGCGGCGT GGCGCCCGAG 
GTGCGGGCCG CCGAGCGGCG CGATGCGTTG ATCCGCGCGG CGACGCGCGT GTTCGGTACG
GTGGGTTTCC GCAAGGCGAC CGTGCGGTCG ATCTGCCAGG AAGCGAAGCT GAACGATCGC
TATTTCTACG CGGCGTTCGA CAGCACAGAG GATCTGTTGC GCTGCACTTA CCTGCATCAC
GCGCAGCAGT TGCATGACGC GGTCGCGCAG GCGGTCGCCG CGCGCGGCGG CGAGCTGCGC
GAGCGCGTCG ACGCGGGGCT CGCCGCATTC TTCGCGTTTC TGCGCGACCC GTGCGCGGCG
CGCGTGCTGC TGCTCGAGGT GATGGGCGTG AGCGCGGATA CCGACATGAC GTACCAGCGC
ATGCTGATCG ACTTCGGCAA GCTGATCATG GCGATCGGCG CGCCGGGCGA GGCCGTCACG
CCTGCCGAGC GCACCGAGCA GCGGCTGATC GGGCTCGCGC TGGTGGGCGC GATGACGAAC
GTCGGCGCGG CGTGGCTGCT GACCGACTAT CGCGATCCGG AGGCGCAGAT GATCGCGAGC
TGCAGGAAGG TGCTGCTGGG GACGTTGGGA ACGGGCAGGT AG
 
Protein sequence
MEKALETEKR GRAYGGVAPE VRAAERRDAL IRAATRVFGT VGFRKATVRS ICQEAKLNDR 
YFYAAFDSTE DLLRCTYLHH AQQLHDAVAQ AVAARGGELR ERVDAGLAAF FAFLRDPCAA
RVLLLEVMGV SADTDMTYQR MLIDFGKLIM AIGAPGEAVT PAERTEQRLI GLALVGAMTN
VGAAWLLTDY RDPEAQMIAS CRKVLLGTLG TGR