| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2612 |
|---|
| Symbol | |
|---|
| ID | 6124276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2912093 |
|---|
| End bp | 2913316 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641639205 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001765895 |
|---|
| Protein GI | 170733948 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGT GCGTATCCGT CTCCGACCGC GCGATCGATC GTGCGGCAGA TTCGTCCACG
CCGGCTCGTG CACGTCTGCC CGTCGCGAAC CTGCTCGCGC TGGCCACCGC CGGCTTCATC
ACGGTGCTCA CCGAAGCGTT GCCGGCCGGC CTGCTGCCGC TGATGAGCGC CGACCTGCAC
GTGACCGAGG CGCTGATCGG TCAACTGGTG ACCGTCTACG CGCTGGGTTC GATCGTCGCG
GCGATCCCGC TCGTCGCCGC GACGCGTGCG ATGCGCCGGC GCCGGTTGCT GCTCGCGGCG
CTGGCCGGCT TCGTCGTGTC GAATGCGCTG ACGGCCGCGT CGCCGTACTA CGCGCTCACG
CTGGCCGCAC GGTTCGTCGC CGGGATGTCG GCCGGGCTGC TGTGGGCGCT GCTGGCGGGC
TACGCGAGCC GGCTGGTCGA CCCGTCGCTG CGCGGCCGGG CGATCGCGGT CGCGATGCTC
GGCATACCGG CAGCGATGTC GATCGGCATT CCGGCCGGCA CGGCGCTCGG CGCGATGTTC
GGCTGGCGCG TCGCGTTCGC CGGGATCACG GTCGCGGCGC TGGCGCTGAT CGGCTGGATT
CGCGTGCGCG TGCCCGACTA TCCGGGCCAG CCGGCCGGCG CGCGCGAGCC GGTGCTCGGC
GTGATGGCGC TGCCCGGCGT GCGGCCGGTG CTGACGGTGA TGTTCGCGTA CGTGCTCGCG
CACAACATGC TGTACACGTA CGTCGCGCCG TTCCTTGCGG ACGTGCGGAT GGGCGCGCAG
GTCGATGTGG TGCTGTTCGT GTTCGGCGTC GCGTCCCTCG TCGGCATTGC GCTGACGGGC
GCATGGATCG GCGTCGCGCA GCGGCGGCTG ACGCTCGCGA GCATCGCGCT GTTCGCATTG
GCGGCGGCGA TGCTCGGCGC CGGATCGGGG ATGACGATCG TCTATGCGGG CGTCGTGCTG
TGGGGACTCG CGTTCGGCGG CGCGCCGACG CTGTTCCAGA CGGCCACCGC GAACGCGGCG
GGGGAGTCGG CCGACGTCGC GCAGTCGATG CTGGTGACGG TCTGGAATCT CGCGATCGCC
GGCGGCGGCA TCGCGGGCGG GATGCTGCTC GGCGCGACGG GCGCCGGTGC GATTCCGTGG
GTGCTCGTCG CGCTGCTGGC GCTGGCGTGG GTCGGCGCGT GGTGCGCCCG CCAGCATGCG
TTTCCGGCGC CGCGCGCCGC CTGA
|
|---|
| Protein sequence | MSECVSVSDR AIDRAADSST PARARLPVAN LLALATAGFI TVLTEALPAG LLPLMSADLH
VTEALIGQLV TVYALGSIVA AIPLVAATRA MRRRRLLLAA LAGFVVSNAL TAASPYYALT
LAARFVAGMS AGLLWALLAG YASRLVDPSL RGRAIAVAML GIPAAMSIGI PAGTALGAMF
GWRVAFAGIT VAALALIGWI RVRVPDYPGQ PAGAREPVLG VMALPGVRPV LTVMFAYVLA
HNMLYTYVAP FLADVRMGAQ VDVVLFVFGV ASLVGIALTG AWIGVAQRRL TLASIALFAL
AAAMLGAGSG MTIVYAGVVL WGLAFGGAPT LFQTATANAA GESADVAQSM LVTVWNLAIA
GGGIAGGMLL GATGAGAIPW VLVALLALAW VGAWCARQHA FPAPRAA
|
|---|
| |