Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2411 |
Symbol | |
ID | 6124075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2693202 |
End bp | 2693981 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641639002 |
Product | ABC transporter related |
Protein accession | YP_001765694 |
Protein GI | 170733747 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00777429 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACTCCC AGACCCAGAA GCTTTTCGTC GACGATCTCC ACAAGCGGTA CGGCGACAAC GAGGTGCTCA AAGGCGTGTC GCTGAGGGCG AACTCGGGCG ACGTGATCAG CGTGATCGGC TCGTCCGGCT CCGGCAAGAG CACGATGCTG CGCTGTATCA ACTTCCTCGA GCAGCCGAAC GCGGGCCGCA TCTTCGTCGA CGGCGAGGAA GTGCGCACCG CGCTCGACAA GACGGGCGCG CTGCGCGCGG CCGATTCGAA GCAGCTGCAG CGCGTGCGCA CCAAGCTGTC GATGGTGTTC CAGCACTTCA ATCTCTGGTC GCACATGAAC GTGATCGAGA ACGTGATGGA AGCGCCGGTG AACGTGCTCG GCATCCCGAA GAAGGAAGCC GAGGACCGTG CGCGCGAGTA TCTCGAGAAG GTCGGCCTCG CGCCGCGCGT CGAGAAGCAA TATCCGTCGC ATCTGTCGGG CGGCCAGCAG CAGCGCGTGG CGATCGCGCG GGCGCTGGCG ATGCATCCGG ACGTGATGCT GTTCGACGAG CCGACCTCGG CGCTCGACCC GGAGCTGGTG GGCGAAGTGC TGAAGGTGAT GCAGAAGCTG GCCGAGGAAG GCCGCACGAT GATCGTCGTC ACGCACGAGA TGGGCTTCGC GCGCAACGTG TCGAACCACG TGATGTTCCT GCACCAGGGG CGCGTCGAGG AACAAGGCGT GCCGGCCGAG GTGCTCGCGA ACCCGAAGAG CGACCGCCTG CGCGCGTTCC TGTCGGGCAG CCTCAAGTAA
|
Protein sequence | MNSQTQKLFV DDLHKRYGDN EVLKGVSLRA NSGDVISVIG SSGSGKSTML RCINFLEQPN AGRIFVDGEE VRTALDKTGA LRAADSKQLQ RVRTKLSMVF QHFNLWSHMN VIENVMEAPV NVLGIPKKEA EDRAREYLEK VGLAPRVEKQ YPSHLSGGQQ QRVAIARALA MHPDVMLFDE PTSALDPELV GEVLKVMQKL AEEGRTMIVV THEMGFARNV SNHVMFLHQG RVEEQGVPAE VLANPKSDRL RAFLSGSLK
|
| |