Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1253 |
Symbol | |
ID | 6122931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1373190 |
End bp | 1374680 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641637827 |
Product | general substrate transporter |
Protein accession | YP_001764550 |
Protein GI | 170732603 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.425201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.218881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGA CCGCAACACA CGTCAGCCCG ACCGCTGTCT CTTCCTCCGC TTCGTCGTCC GGCGAAGCCC CGCTCGCCGC GGACGACATC ACCGTCGTCG ACCAGAGCCT GCTCAAGCGC GCCGTCAGCG CAATGGCCAT CGGCAATGCG ATGGAATGGT TCGACTTCGG CGTCTACAGC TATATCGCCG TCACGCTCGG CAAGGTGTTC TTCCCGTCGA GCAGCCCGTC CGCGCAGTTG CTGGCCACCT TCGGCACGTT CGCGGCCGCG TTCCTCGTGC GCCCGCTCGG CGGCATGGTG TTCGGCCCGC TCGGCGACCG CATCGGCCGC CAGCGCGTGC TCGCCGCGAC GATGATCATG ATGGCCGTCG GCACCTTCGC GATCGGCCTG ATCCCGAGCT ATGCGTCGAT CGGCATCATG GCCCCGATCC TGCTGCTCGT CTCCCGCCTC GTGCAGGGCT TCTCGACCGG CGGCGAGTAC GGCGGCGCCG CCACCTTCAT CGCCGAGTTC TCGACCGACA AGCGCCGCGG CTTCATGGGC AGCTTCCTCG AATTCGGCAC GCTGATCGGC TATGTGCTGG GCGCAGGCGT CGTCGCGCTG CTCACCGCGT CGCTGTCGCA GGAAGCGCTG CTGTCGTGGG GCTGGCGCGT GCCGTTCCTG ATCGCCGGGC CGCTCGGCCT GATCGGTCTG TACATCCGGA TGAAGCTCGA GGAAACGCCG GCGTTCAAGC GTCAGGCCGA AGAGCGCGAA GCGCAGGACA AGGCCGTGCC GAAGGCGCGC TTCCGCGAGA CGCTGCTCGC CAACTGGCGT GCGCTGCTGC TGTGCGTCGG CCTCGTACTG ATCTTCAACG TGACCGACTA CATGGTGCTG TCGTACCTGC CGAGCTTCAT GTCGTCGACG CTGCACTTCG ACGAATCGCA CAGCCTCGTG CTGGTGCTGA TCGTGATGGT GCTGATGATG CCGATGACGC TGTACGCCGG CCGCCTGTCG GACAAGGTTG GCCGCAAGCC GGTGATGCTC GCCGGTTGCG TCGGCCTGCT GGTGCTGTCG ATCCCGTCGC TGATGCTGAT CCACACGGGC ACCACGGCGT CGGTGTTCGC CGGCCTGCTG ATCCTCGGCG TGCTGCTGTC GTGTTTCACG GGTGTGATGC CGTCGGCGCT GCCCGCGCTG TTCCCGACCG AGATCCGCTA CGGCGCGCTC GCGATCGGCT TCAACGTGTC GGTGTCGCTG TTCGGCGGCA CGACGCCGCT GGTGACCGCG TGGCTCGTCG ACGTGACGCA CAACCTGATG ATGCCCGCGT ACTATATGAT GGGCGCCGCG CTGATCGGCA TCGTGTCGGT CGTCGCGCTC GCCGAAACCG CGCGCCAGCC GCTGAAGGGC TCGCCGCCGG CCGTCGCGAC GCGCCGCGAA GCGCACCAGC TCGCGCGCCA GTTGCGCGAG GACGACGACG AATCGGAGGT CTACGGCGTC GCGACTCCCG CCCGCGCGTA A
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Protein sequence | MTLTATHVSP TAVSSSASSS GEAPLAADDI TVVDQSLLKR AVSAMAIGNA MEWFDFGVYS YIAVTLGKVF FPSSSPSAQL LATFGTFAAA FLVRPLGGMV FGPLGDRIGR QRVLAATMIM MAVGTFAIGL IPSYASIGIM APILLLVSRL VQGFSTGGEY GGAATFIAEF STDKRRGFMG SFLEFGTLIG YVLGAGVVAL LTASLSQEAL LSWGWRVPFL IAGPLGLIGL YIRMKLEETP AFKRQAEERE AQDKAVPKAR FRETLLANWR ALLLCVGLVL IFNVTDYMVL SYLPSFMSST LHFDESHSLV LVLIVMVLMM PMTLYAGRLS DKVGRKPVML AGCVGLLVLS IPSLMLIHTG TTASVFAGLL ILGVLLSCFT GVMPSALPAL FPTEIRYGAL AIGFNVSVSL FGGTTPLVTA WLVDVTHNLM MPAYYMMGAA LIGIVSVVAL AETARQPLKG SPPAVATRRE AHQLARQLRE DDDESEVYGV ATPARA
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