Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0444 |
Symbol | |
ID | 6122125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 482280 |
End bp | 482915 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641637001 |
Product | TPR repeat-containing protein |
Protein accession | YP_001763744 |
Protein GI | 170731797 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.603542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.496155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACC GTCTGTTCGC AAAACTGTCT GGGGTAGTGG TGGCTTGCGG CGTGATCGCC GGCTGTGCGA GCCAGCCTCC CGCGCCGCCG ACTGCGGAAG TGTTCAACAA GTCGCTGGCC GATGCGGACG CCGTCGCGAA GGCGGGGGAC CAGGACAAGG CGCTCGGCCT GTACCAGCAG CTCGCGAAGT CGGATCCGAC GCGCGAGGAA CCGTGGTCGC GCATCGCGCA AATCCAGTTC GCGCAAAACC ATTACGGGCA GGCGATCGTC GCCGCCCAGG AAGCGCTGCA GCGCGACGCG ACCGATCGTC AGGCGAAGAG CGTGCTGGCC GTTGCCGGCC TGCGGATCGC GACGCAGTCG CTCGGCGAGC TGCGCCAGGA CGCATCGCTC GCGGGCGATG CGAAGTCCGA CGCGCAGGCG CTCGCGAAGC AACTGCGCGA TACGCTCGGC GAATCGGCGC TGTTTCCGCC GGAAACCAAG ACCGTGAAAC CGCGCCCGCC GCGCCGCGTC GTCCATCGCC CGAAGGGCGG GGCCGCGCCG GCTGCCGATG CGGCTGCGCC GGCCGCACCG AGCGCGCCGA CGCCGCCCGT GGCGCAAAAG GGCAGCGCGG ACCCGTTCGG CGCACTGCGC AACTGA
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Protein sequence | MKDRLFAKLS GVVVACGVIA GCASQPPAPP TAEVFNKSLA DADAVAKAGD QDKALGLYQQ LAKSDPTREE PWSRIAQIQF AQNHYGQAIV AAQEALQRDA TDRQAKSVLA VAGLRIATQS LGELRQDASL AGDAKSDAQA LAKQLRDTLG ESALFPPETK TVKPRPPRRV VHRPKGGAAP AADAAAPAAP SAPTPPVAQK GSADPFGALR N
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