Gene Bcen_6387 details

Gene Information

• Locus tag: Bcen_6387
• ID: 4096472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008062
• Strand: +
• Start bp: 1011956
• End bp: 1014001
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 638019675
• Product: transketolase
• Protein accession: YP_626222
• Protein GI: 107029127
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGATC CCACCGCACA TTCCCGCACG ACCGCCAAAG CGGTGCCGCC CCCGCGAGAC 
CCGCATCTGC GCGCGCTGGC GAACTGTATT CGCTTCCTTG CAATGGATGC AGTACAGAAT 
GCCAACAGCG GCCATCCTGG TGCGCCAATG GGGCTGGCCG ACGTTGCGAC GGTGCTGTTC 
AAGGAGTTCA TGCAATTTGA TGCATCCGCC CCCCACTGGA TCGATCGGGA CCGGTTGGTC 
CTTTCCAACG GACACGCATC GATGCTCCTC TACAGCTTGC TCTATCTCAC GGGCTATGCC 
GACATGACCC TCGACGAGCT CAAGCGCTTC CGGCAAGTCG GCAGCAAGAC GCCAGGTCAT 
CCCGAGTACT CGCACGCCGA TGGAATCGAA CTGACGACCG GTCCCCTCGG ACAAGGCATC 
GCGGAATCCG TCGGCATGGC GTTGGCCGAG CGCGTCATGA ATGCGCACTT CGGCGATGAC 
CTCGTCGATC ACTACACATA CGTATTTCTC GGCGACGGTT GCCTGATGGA AGGCATCAGC 
CACGAGGCCA TTTCGTTGGC CGGCCACCTC CGGTTGGGCA AACTGATCGC GTTCTGGGAC 
AACAATTCGA TTTCCATCGA CGGTCCCACC CAGCTCGCGG TCTCGGACAA CGAGATCGAG 
CGCTTTCACT CGGCTGGGTG GCACGTCCTG GAAATCGACG GTCACGATAC GGACGCGATA 
CGGCGCGCGA TCGAGACCGC CAGGACAACG CATGACAGAC CGACGTTGAT CGCATGCAGG 
ACGATCATCG GGTTCGGCTT TCCGACGAAG GCTGGCACCG AGAAAGCCCA TAGCGATGCG 
CCGGGCGAGG ATGAAATCGC GGGCGCACGC CAGACCCTCG ATTGGCATTC GCCGCCGTTC 
GAAATCCCGG ATGACCTGCT GAAAGCATGG CGGGAGATCG GGGCGCGCGG CCGCAAGGCA 
AGACTCGCGT GGGATGAGCG TGTCAGCCGG GCGCCGCACG CGCTGCGTAC CGAATTCGAC 
CGACGTAATG CCGGAAAGCT TCCGGATGAC TGGAAGACGG CGATTGCGGC GGCACGGCAG 
GCGTTTGTTG CCGCAGGCAG TGCAATGGCC ACCCGCAAGG CCAGCGGTGA AGTGCTTGAT 
CAACTCTCCG ATGCGATTCC GGAATTGCTG GGCGGCTCGG CGGATCTTAC GCAGTCCAAT 
AATACGAAGA CGAAGAACCA GATCGCGATC GAGCCCGGGC AGTTCAAGGG TTCATATGTC 
CACTACGGCG TCCGCGAACA CGGCATGGCC GCCGCCATGA ACGGCATTGC CCTTCACGGC 
GGCCTCATTC CGTACGGTGG CACCTTTCTT TGTTTTTCGG ACTACTGCCG TCCGGCGATC 
CGCTTGAGCG CGATGATGCG GGTGCGCGCC ATCTTCGTGA TGACGCACGA TTCCATCGGT 
CTCGGAGAAG ATGGCCCGAC GCATCAACCC GTCGAGCACC TTGCCGCCCT TCGGGCCATT 
CCCCAACTCG CCGTCTATCG GCCGGCCGAT CCAGTCGAAA CGGCAGAGTG CTGGGAGCTG 
ATTCTCGAAC AGCCCCGCAG GGCTGCGCTG CTCGCATTGT CACGACAGCC GGTCCCGCTC 
CTGCGCAACG AGCCCGGAAA CGAAAACAAG TCGGCGCGCG GCGCCTATGT CTTGCGGGAG 
GCCGATGGCG GGCCGCGCCG ACTCACCCTG CTCGCGACAG GCTCGGAGGT CGACCTCGCC 
GTCCAGGCAC GCGACATCCT GCAGCAGGAA GGCGTGCCGA CGGCCGTCGT ATCGATGCCG 
TGCCGCCTGC TCTTCGAGGA GCAACCACGC GATTACCAGT GGGCCGTGCT GGGCACTTCT 
CCCGCGAGAG TCGCGGTCGA GGCGGCGGTC GAACTGGGAT GGGAGCGGTA CCTCGGACCG 
GAAGGCCGGT TCGTCGGCAT GCACAGCTTC GGCGAGTCGG GAAAAATCAA GGACGTGTAC 
AAAAAATTCG ACATCACGGT CGATGCGGTC GTTCGAGCGG CGCGTCAGGT GCTGTCCGAA 
GTGTGA 

 

Protein sequence

MSDPTAHSRT TAKAVPPPRD PHLRALANCI RFLAMDAVQN ANSGHPGAPM GLADVATVLF 
KEFMQFDASA PHWIDRDRLV LSNGHASMLL YSLLYLTGYA DMTLDELKRF RQVGSKTPGH 
PEYSHADGIE LTTGPLGQGI AESVGMALAE RVMNAHFGDD LVDHYTYVFL GDGCLMEGIS 
HEAISLAGHL RLGKLIAFWD NNSISIDGPT QLAVSDNEIE RFHSAGWHVL EIDGHDTDAI 
RRAIETARTT HDRPTLIACR TIIGFGFPTK AGTEKAHSDA PGEDEIAGAR QTLDWHSPPF 
EIPDDLLKAW REIGARGRKA RLAWDERVSR APHALRTEFD RRNAGKLPDD WKTAIAAARQ 
AFVAAGSAMA TRKASGEVLD QLSDAIPELL GGSADLTQSN NTKTKNQIAI EPGQFKGSYV 
HYGVREHGMA AAMNGIALHG GLIPYGGTFL CFSDYCRPAI RLSAMMRVRA IFVMTHDSIG 
LGEDGPTHQP VEHLAALRAI PQLAVYRPAD PVETAECWEL ILEQPRRAAL LALSRQPVPL 
LRNEPGNENK SARGAYVLRE ADGGPRRLTL LATGSEVDLA VQARDILQQE GVPTAVVSMP 
CRLLFEEQPR DYQWAVLGTS PARVAVEAAV ELGWERYLGP EGRFVGMHSF GESGKIKDVY 
KKFDITVDAV VRAARQVLSE V