Gene Bcen_6325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6325 
Symbol 
ID4097350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp940574 
End bp941311 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID638019614 
Productputative periplasmic chaperone protein 
Protein accessionYP_626161 
Protein GI107029066 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.997215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTCC CAGCTCTCCA TTTCCCGCGG TTTTTCCCGC TCGCCCTGCT CGCCGGTTGC 
CTGCTCGGGC CGGCCGCCGT TCACGCGATG GGCGTCGTGC CCGAAACGTC GGTCGTGATC
GTCGACGAAG CCGACGGCGA AGGCACGATC TCGGTCAAGA ACACCGATGA TCAGCCGACG
CTGCTGCACA CGACGATCGA GCCGATTCCC GAAGACGATG CCGTGCTCGT GGTCGTGACC
CCGCCGATCG CGCGAGTCGA AGGCGGTGCG GTGCAACTCG TCCGGTTCGT CCTCGCCAGC
GACGCACCGC TCGCCACGCA GCGCCTCGCC CGCGCGTCGT TCTCGGGCAT TCCGCCAAAG
CGTCCGGGCC GCAACGAGAT CCGGACGATC ATCCGCCAGA ACCTGCCCGT ACTGATCCAG
CCGCGCGATC TCGCGCGCAA CGACGCACCG TGGACGTTGC TGAAGTGGTC GGTCGAAGGC
CGCGAACTGG TCGTGCGCAA CGACAGTCGC TACGTGGTGC GCCTCGAACA GAAAGTGCAG
TTGCTTCCGA CCGAGCAGAT CGTGTCGCTG CCGGCGCCTT ACGTGCTGGC CGGGCAAACC
CGCCGGATCG CGCTCGCCGA GCGTCCCGCG ACGCTCGAAC AGGTACGGAT CTTCCCGGCC
ACCGTCTACG GCTACTCGGT CGATCACTAC GACGCGGCGC TCGCGCCCCG TGCGGCCGAT
GCGGCCTCGC ACCAGTAG
 
Protein sequence
MTLPALHFPR FFPLALLAGC LLGPAAVHAM GVVPETSVVI VDEADGEGTI SVKNTDDQPT 
LLHTTIEPIP EDDAVLVVVT PPIARVEGGA VQLVRFVLAS DAPLATQRLA RASFSGIPPK
RPGRNEIRTI IRQNLPVLIQ PRDLARNDAP WTLLKWSVEG RELVVRNDSR YVVRLEQKVQ
LLPTEQIVSL PAPYVLAGQT RRIALAERPA TLEQVRIFPA TVYGYSVDHY DAALAPRAAD
AASHQ