Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6325 |
Symbol | |
ID | 4097350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 940574 |
End bp | 941311 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638019614 |
Product | putative periplasmic chaperone protein |
Protein accession | YP_626161 |
Protein GI | 107029066 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.997215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTCC CAGCTCTCCA TTTCCCGCGG TTTTTCCCGC TCGCCCTGCT CGCCGGTTGC CTGCTCGGGC CGGCCGCCGT TCACGCGATG GGCGTCGTGC CCGAAACGTC GGTCGTGATC GTCGACGAAG CCGACGGCGA AGGCACGATC TCGGTCAAGA ACACCGATGA TCAGCCGACG CTGCTGCACA CGACGATCGA GCCGATTCCC GAAGACGATG CCGTGCTCGT GGTCGTGACC CCGCCGATCG CGCGAGTCGA AGGCGGTGCG GTGCAACTCG TCCGGTTCGT CCTCGCCAGC GACGCACCGC TCGCCACGCA GCGCCTCGCC CGCGCGTCGT TCTCGGGCAT TCCGCCAAAG CGTCCGGGCC GCAACGAGAT CCGGACGATC ATCCGCCAGA ACCTGCCCGT ACTGATCCAG CCGCGCGATC TCGCGCGCAA CGACGCACCG TGGACGTTGC TGAAGTGGTC GGTCGAAGGC CGCGAACTGG TCGTGCGCAA CGACAGTCGC TACGTGGTGC GCCTCGAACA GAAAGTGCAG TTGCTTCCGA CCGAGCAGAT CGTGTCGCTG CCGGCGCCTT ACGTGCTGGC CGGGCAAACC CGCCGGATCG CGCTCGCCGA GCGTCCCGCG ACGCTCGAAC AGGTACGGAT CTTCCCGGCC ACCGTCTACG GCTACTCGGT CGATCACTAC GACGCGGCGC TCGCGCCCCG TGCGGCCGAT GCGGCCTCGC ACCAGTAG
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Protein sequence | MTLPALHFPR FFPLALLAGC LLGPAAVHAM GVVPETSVVI VDEADGEGTI SVKNTDDQPT LLHTTIEPIP EDDAVLVVVT PPIARVEGGA VQLVRFVLAS DAPLATQRLA RASFSGIPPK RPGRNEIRTI IRQNLPVLIQ PRDLARNDAP WTLLKWSVEG RELVVRNDSR YVVRLEQKVQ LLPTEQIVSL PAPYVLAGQT RRIALAERPA TLEQVRIFPA TVYGYSVDHY DAALAPRAAD AASHQ
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