| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6055 |
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| Symbol | |
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| ID | 4097106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008062 |
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| Strand | - |
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| Start bp | 649496 |
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| End bp | 651505 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638019343 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_625893 |
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| Protein GI | 107028798 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0597355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACCA AATTAACCGT CAAGAATCCG AAGCCGGCGT CGCCGACTCG CGCCCCTGTC
CGCTCCGGCA GCCTCGTCGC CCGCAAGGCG GTGCGCCCCG CCGCGCCGCC CGCGGGGGAT
AAGCCGGCCC GCCCGAAGAA GGCGCCCGCT GCGGCCGCCG CTACCGGCGA GCGCTCGTTC
AAGCCGCGCG GTGCCGCCGG CGCCGAGCGT CCGGGCGCGG ATCGCGCACC GGCCAAGCGC
GCCCCGCGTG ACGGCGGTGC CGAGCGTGGC GCGCGCGCGC CGTATCGCGA GAACGCGGCC
GGTGAAGGTG CGAAGCGCAG TTTTGGCGAT CGGCGTACGT CGTCGGATCG CCCGCCGCGC
CGCGATGACG ATGCACGTCC GCGTCGCGCG AGTGGCGAAG GCAGCACACG CGCGCCCTAT
CGCGACAACG CAGCCGGCGA AGGCGCGAAG CGCAGCTTCG GCGACCGCCG CACGTCGTCC
GATCGTCCGC CGCGCCGTGA TGACGATGCA CGTCCGCGCC GCGCAGGTGC CGACGAAGGC
AAGCGCCCGT CCTATCGCGA CAACGCAGCC GGCGAAGGCG CGAAGCGCAG TTTCGGCGAC
CGTCGCACGG CGTCCGATCG TCCGCCGCGC CGTGACGACG ATGCGCGTCC GCGTCGCACA
GGCGCCGATG AAGGCAAGCG CCCGTCCTAT CGCGACAACG CGGCCGGCGA AGGTGCGAAG
CGCAGTTTCG GCGATCGGCG TACGTCTTCC GATCGACCGG CTCGCCGCGA TGACGATACA
CGTCCGCGCC GCACGGGCAC TGATGAAGGC AAGCGCCCGT CCTATCGCGA CAACGCATCC
GGCGACGGCG CGAAGCGCAG TTTTGGCGAT CGCCGCACGT CGTCCGATCG TCCGCCGCGC
CGTGATGACG ATGCACGTCC GCGCCGCGCA GGCGCCGACG AAGGCAAGCG CCCGTCCTAT
CGCGACAACG CATCCGGCGA AGGCGCAAAG CGCAGCTTCG GCGATCGCCG CACGTCGTCC
GATCGTCCGC CGCGCCGCAG CGACGACGAT GCACGTCCGC GCCGTGCAGC AGGTGGCGAC
GACAGCAAGC GCCCGTCCTA CCGCGACAAG TCCGCCGGCG ACGGCGCGAA GCGCAGCTTC
GGCGACCGTC CGGCCCGCCC CACGCGCGAC GGCGAGCGCC GTTCGTTCGG CGCGGTGAAG
ACCGCGCAAC CCGTCAAGCG CGCGGCGGCC GACGTCGACT ACGGCGACGA AACGGGACTG
ATGCGCCTGT CGAAGCGGAT GTCCGAACTC GGCATGTGCT CGCGCCGCGA AGCCGACGAA
TGGATCGAAA AGGGCTGGGT GCTCGTCGAC GGCGCACGCA TCGACACGCT CGGCACCAAG
GTGCGCGCCG ACCAGAAGAT CGAGATCGAC GAGCGTGCGA GCGCCGCGCA GGCCGCGCAA
GTGACGATCC TGCTGCACAA GCCGGTCGGC TACGTATCGG GCCAGGCGGA AGACGGCTAC
GAGCCGGCGG CCGTGCTGAT CACGCGCGCG AACCGCTGGA GCGGCGACCA TTCGCCGGTG
CGCTTCTCCC CGCAACACCT GCATGCACTC GCACCGGCCG GCCGTCTCGA CATCGACTCC
ACCGGCCTGC TCGTGCTGAC GCAAAACGGC GTGATCGCGA AGCAGTTGAT CGGCGAACAG
TCGGACATCG ACAAGGAATA CCTGGTGCGC GTGCGCTTCG GCGAGCGACT GATCGACATC
GACCAGCACT TCCCGGCGGA ATCGCTCGCG AAGCTGCGCC ACGGCCTCGA GCTCGACGGC
GTCGCGCTGA AGCCCGCGCT GGTGAGCTGG CAGAACGGCG AGCAGTTGCG CTTCGTGCTG
CGCGAAGGCA AGAAGCGCCA GATCCGCCGC ATGTGCGAAC TGGTCGGCCT CGACGTGATC
GGCCTGAAAC GCGTGCGCAT GGGTCGCGTG ATGCTCGGCG CGCTGCCGCA AGGCCAATGG
CGCTATCTGT CCGCCGACGA GACGTTCTGA
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| Protein sequence | MRTKLTVKNP KPASPTRAPV RSGSLVARKA VRPAAPPAGD KPARPKKAPA AAAATGERSF
KPRGAAGAER PGADRAPAKR APRDGGAERG ARAPYRENAA GEGAKRSFGD RRTSSDRPPR
RDDDARPRRA SGEGSTRAPY RDNAAGEGAK RSFGDRRTSS DRPPRRDDDA RPRRAGADEG
KRPSYRDNAA GEGAKRSFGD RRTASDRPPR RDDDARPRRT GADEGKRPSY RDNAAGEGAK
RSFGDRRTSS DRPARRDDDT RPRRTGTDEG KRPSYRDNAS GDGAKRSFGD RRTSSDRPPR
RDDDARPRRA GADEGKRPSY RDNASGEGAK RSFGDRRTSS DRPPRRSDDD ARPRRAAGGD
DSKRPSYRDK SAGDGAKRSF GDRPARPTRD GERRSFGAVK TAQPVKRAAA DVDYGDETGL
MRLSKRMSEL GMCSRREADE WIEKGWVLVD GARIDTLGTK VRADQKIEID ERASAAQAAQ
VTILLHKPVG YVSGQAEDGY EPAAVLITRA NRWSGDHSPV RFSPQHLHAL APAGRLDIDS
TGLLVLTQNG VIAKQLIGEQ SDIDKEYLVR VRFGERLIDI DQHFPAESLA KLRHGLELDG
VALKPALVSW QNGEQLRFVL REGKKRQIRR MCELVGLDVI GLKRVRMGRV MLGALPQGQW
RYLSADETF
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