| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5964 |
|---|
| Symbol | |
|---|
| ID | 4097252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 545749 |
|---|
| End bp | 546510 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638019244 |
|---|
| Product | lipoprotein releasing system, ATP-binding protein |
|---|
| Protein accession | YP_625802 |
|---|
| Protein GI | 107028707 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.115719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACC GCGCGGCCGC ATTCGCGGAT TCACGACAAC AACACAACAG ACAGGATTCG
GCAGGTATGC AGGAATACGT GCTTCAGGCG CGCGGGATCA CGAAGGCGTT CGTGCAGGGC
GGCTTCAACG TGCAGGTGCT CAACAACACC GAGCTGACGG TGCGGCGCGG CGAGAAGCTC
GCGGTCGTCG GCGCGTCGGG CTCCGGCAAG AGCACGCTGC TGCACGTGCT GGGCGGGCTC
GACGAGCCGA GCGCCGGCGA AGTGTCGCTG CTCGGCAAGC CGTTTACGCA ACTCGCCGAG
CGTGAGCGCA ACGAGTTGCG CAACCGCGCG CTCGGCTTCG TCTACCAGTT CCACCACCTG
CTGCCCGAGT TCACTGCGCT CGACAACGTC GCGATGCCGC TGCGCATCCG CCGGATGACC
ACCGAGGACG CGCGCGAGCA GGCACAGGCG ATGCTCGAAC GCGTCGGTCT CGGCCCGCGG
GCGAAGCACC GGCCGGGCGA GCTGTCGGGC GGCGAACGGC AGCGCGTCGC GATCGCGCGT
GCGCTGGTCA CGAAGCCCGC GTGCGTGCTC GCCGACGAGC CGACCGGCAA CCTCGACGGC
ACGACGGCCG ACACGGTGTT CAACCTGATG CTCGAACTGT CCGAGACGCT CGAAACGAGT
TTCGTGATCG TCACGCACGA CCCCGATCTC GCCGCGCGTT GCGATCGCAT CATGCGACTG
CGCGACGGGG TGCTGCACGA GGAGCCGGCG CTGCCGGTGT AA
|
|---|
| Protein sequence | MNDRAAAFAD SRQQHNRQDS AGMQEYVLQA RGITKAFVQG GFNVQVLNNT ELTVRRGEKL
AVVGASGSGK STLLHVLGGL DEPSAGEVSL LGKPFTQLAE RERNELRNRA LGFVYQFHHL
LPEFTALDNV AMPLRIRRMT TEDAREQAQA MLERVGLGPR AKHRPGELSG GERQRVAIAR
ALVTKPACVL ADEPTGNLDG TTADTVFNLM LELSETLETS FVIVTHDPDL AARCDRIMRL
RDGVLHEEPA LPV
|
|---|
| |