Gene Bcen_5618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5618 
Symbol 
ID4096846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp145641 
End bp146303 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID638018894 
ProductOmpA/MotB 
Protein accessionYP_625460 
Protein GI107028365 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.271834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAACA TCCATCTTGT TCTGCTGGCG TCCGTCGTTT CCCTCGCGGC CTGTTCGAGT 
GCGTCGGGGC CGACGTACAA CGCGTACGAG CTGCAGTCGC GAAACGGCAT CCGGACGTTC 
CAGGTCGATT GCCACGGCAT CCTGTCGACC GCGAAGACCT GCATGAAGGT CGCGACGCGC 
ATGTGCGGCA ACGAGCCCGT GCGCCTGGTC GACACCACGA CGCCGTACCG CGACGGCGCC 
GATCCGCATT CGATCGTGTT CCAGTGCGGC GCGGCCCCCG CGCCGACGGC CGCGGCCGTT 
GCGCCGGCGC CCGCGCCGGT CGAGAAGGTG AGCCTGACCG GCGATGCGTA TTTCGCGACG 
GACTCGGCCG TGCTGACGCC TGCGGCCACC GCCGCGCTCG ACACGCTGCT GAACCGGCAG 
GCCGACCGGC ATTTCGCGCG CGTGGAAGTG GACGGCTATA CCGACGCGAC CGGCTCGGAT 
GCGCACAATC AGGCGCTGTC GAAGCGCCGG GCGGATGCGG TCGCCGGGTA TCTGCGCGAG 
CACGGGCTGA AGGCGGATTC GTTCGCTGCA GCCGGTCACG GGGAAGCCAA TCCGGCGGCG 
TCGAACGATA CCGCCGAAGG GCGCGCGCGC AATCGTCGCG TGGAAATCTC GCTGCAGAAG 
TAG
 
Protein sequence
MKNIHLVLLA SVVSLAACSS ASGPTYNAYE LQSRNGIRTF QVDCHGILST AKTCMKVATR 
MCGNEPVRLV DTTTPYRDGA DPHSIVFQCG AAPAPTAAAV APAPAPVEKV SLTGDAYFAT 
DSAVLTPAAT AALDTLLNRQ ADRHFARVEV DGYTDATGSD AHNQALSKRR ADAVAGYLRE 
HGLKADSFAA AGHGEANPAA SNDTAEGRAR NRRVEISLQK