Gene Bcen_5548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5548 
Symbol 
ID4097331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp67225 
End bp68607 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content69% 
IMG OID638018827 
Productaminotransferase 
Protein accessionYP_625393 
Protein GI107028298 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCACA CGCTTCCACA TACCGGCATC GAGCACGAAC GCGTACAGGC CTTGCTCGCC 
CATGAGCGCG CCGAGTACGC GCAACGCAAC CCGAAGTCGC AGGTGATGTC CGCACGCGCC
GCGCCGCAGC TGATGTTCGG CGTGCCGCTG CACTGGATGA ACGACTGGTC GACGCCTTTC
GCGCTGCACG TGGCCCAGGC CCAGGGGGCA CAACTCACCG ATGTGGACGG TCACACGCTG
GCCGACTTCT GCCTGGGTGA CACGGGCGCC ATGTTCGGCC ATTCGCCCGC CGTCGTGACC
GAGGCACTGG CGACCCAGGC ACGGCAGGGC CTCACCACCA TGCTGCCCAA CGAGGACGCA
TCCGTCGTGG GTGAATTGCT GGCTCGGCAT TTCGGTCTGC CGAAATGGCA GTTCGCGATG
ACGGCCAGCG ACGCCAACCG TTTCTTGCTG CGCTGGGTAC GTGCCGCCAC CGGGCGGCGT
ACCTTGCTGG TGTTCAACGG CTGCTACCAC GGCACGGTCG ATGACGTCTT CGTCGACCTG
GTGGACGGCC AACCCACGCA ACGCGCCAGC CTGCTGGGCC AGGTGCACGA TCTCACCATC
ACCACGCGCG TGGTGGAATT CAACGACCTG GCCGCGCTGG AAGCCGCGTT GGCCCCGGGC
GACGTGGCCT GCGTCCTGGC CGAGCCAGTG ATGACCAACA TCGGCATGGT GCTGCCCGAA
CCGGGCTACT GGGCGCAGGC GCAAGACCTC ATCCGCCGCC ACGGCAGCCT GCTGGTACTG
GACGAGACCC ACACGCTCAG CAGCGGCCCC GGCGGCTATG CGTGCGCTCA CGGCCTGCAG
CCCGATGCCG TGGTGGTGGG CAAGGCACTG GGCGGCGGCA TGCCGTGCGC AGCCTATGGT
TTCAGCGCCG CACTGGCCGA GCGCGCCGAG GCCGCCAAGC GCACGGCACC GCCGGGCCAC
TCGGGCATCG GCACCACGCT GACCGCCAAC CTGCTGGCCA TGGCGGCGAT GCGCGCCACG
CTCACGCATC TGATGACGCC CGAGGTCTTC GCCCCGATGC ACGCGCTGGC CGAGCAACTG
GCCGCCGGGC TGCGCACGAT CATCGCCCGC CACGGCCTGC CCTGGTGCGT CACCCAGGTG
GGCGCCCGGG TGGAGTTCCA GTTCTGCCCG CAGCCGCCGC GCAACGGCAG CCAGGCCGAG
GCGGTGATGG ATGCCGAGCT GGAGCACGCG CTGCATCTGG CGTTGCTGAA CCGCGGCGTA
CTCATCACGC CTTTTCACAA TATGATGCTC GTCTGCCCTG ACACGACCCG GATGCACGTG
CAGCGCCTGC TCGCCGCATT CGACACCGTG CTGGCTTCGC TCACCGCCGC TGCCGATTCA
TGA
 
Protein sequence
MNHTLPHTGI EHERVQALLA HERAEYAQRN PKSQVMSARA APQLMFGVPL HWMNDWSTPF 
ALHVAQAQGA QLTDVDGHTL ADFCLGDTGA MFGHSPAVVT EALATQARQG LTTMLPNEDA
SVVGELLARH FGLPKWQFAM TASDANRFLL RWVRAATGRR TLLVFNGCYH GTVDDVFVDL
VDGQPTQRAS LLGQVHDLTI TTRVVEFNDL AALEAALAPG DVACVLAEPV MTNIGMVLPE
PGYWAQAQDL IRRHGSLLVL DETHTLSSGP GGYACAHGLQ PDAVVVGKAL GGGMPCAAYG
FSAALAERAE AAKRTAPPGH SGIGTTLTAN LLAMAAMRAT LTHLMTPEVF APMHALAEQL
AAGLRTIIAR HGLPWCVTQV GARVEFQFCP QPPRNGSQAE AVMDAELEHA LHLALLNRGV
LITPFHNMML VCPDTTRMHV QRLLAAFDTV LASLTAAADS