Gene Bcen_4797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4797 
Symbol 
ID4095763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp2066917 
End bp2067504 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content62% 
IMG OID638018083 
ProductSel1 repeat-containing protein 
Protein accessionYP_624649 
Protein GI107027138 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGCC GTCTACTCGC ACCGGGGCTG CTGTTGCTGT TGGCCGCGTG CGCGCAAGAC 
CCGTCGGTCA CCGCCAGCAC GGTACGGATC TGCGACGACA CAGGTTGTTC CGATCGCCCT 
AAAGATCAGG TCTCCTATCA AAAAAGGGAC GATGCGGAAG AGCGGGACGA TCCGCGCATC 
GCCGCGCTCA AGCAAACCGC GAAAACCCAG CCGAAGGCCG CCTACGACCT CGGCCTGCGC 
TATTTCCGCG GCGACGGCGT GCGCCAGGAC AGCTATCAGG CGCTCAAGTG GATGCGCGAA 
GCGGCCGAGC GCGGCGACCT GAACGCGCAG AAGGCGCTCG GCAGTTTCTA CCTGTTCGGT 
CTCGAGGAAA TGGGCTCGGA TGCGCGCGAA GCGGAGAAGT GGCTGTCGAT CGCGGCCGCT 
CGCGGCGACA AGGAATCGAA AAAGCTGCTC GATCTCGCGC GCAAGGCGAA GAAAGAGGAC 
GAAGAAGACT GGAAATGGCG CACGCAATGG CGTGACACCT ATTACGGCTA CTGGTACTCG 
GGCTATCCGT ACTACGGCGT CTGGCAGCAG ACGTACTGGT ACTACTGA
 
Protein sequence
MYRRLLAPGL LLLLAACAQD PSVTASTVRI CDDTGCSDRP KDQVSYQKRD DAEERDDPRI 
AALKQTAKTQ PKAAYDLGLR YFRGDGVRQD SYQALKWMRE AAERGDLNAQ KALGSFYLFG 
LEEMGSDARE AEKWLSIAAA RGDKESKKLL DLARKAKKED EEDWKWRTQW RDTYYGYWYS 
GYPYYGVWQQ TYWYY