Gene Bcen_3989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3989 
Symbol 
ID4094505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1156134 
End bp1156544 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content72% 
IMG OID638017283 
Producttransport-associated 
Protein accessionYP_623851 
Protein GI107026340 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.279726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCAA CGGAAAACAC GCGGCACGAC CGCACCGGCG GCAAGCCGGC GCGCACGCGA 
CGCAGGACGC CGGCCGTGCC GATCGCGAGC ATACTGATGC TGTCGTGTGC ATGGATCGCG
ACACCCCGCT ACGCATCGGC CGAGGAGGGC ACGCGTGCGA AGCTCGCGAG CCAGGCGTCG
GCTGTCGGGG GCCAGATCCG CGATGCGACG CTCGCGTCCC GTGTCAGGGC CGCGCTCGTC
GCCGAACGCG GTCTGGCCTC CGGCGACATC GACGTGCAGG TGCGTGACCG CGTGGCCGAG
CTCACGGGCA ACGTGCCCGA CGAGCGGCAA CGCGCGACCG CGATCCGCGT CGCGCACGAC
GTCAGCGGCG TGAGCGGCGT GCGCGACAAG CTGCAGATCC GCCGGAAGTA A
 
Protein sequence
MDATENTRHD RTGGKPARTR RRTPAVPIAS ILMLSCAWIA TPRYASAEEG TRAKLASQAS 
AVGGQIRDAT LASRVRAALV AERGLASGDI DVQVRDRVAE LTGNVPDERQ RATAIRVAHD
VSGVSGVRDK LQIRRK