Gene Bcen_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1533 
Symbol 
ID4092645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1705312 
End bp1706730 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content64% 
IMG OID638014807 
ProductNa+/solute symporter 
Protein accessionYP_621411 
Protein GI107023084 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCT TCAGTTATTG GGATACCGCC ACCATCATCG GGATGGTGGT TGCCTACATC 
GTGGTGACGA GCGTGGTTAG TATCCGGCTG CGCAGCCGCA ATTCCGAACA GTTCATGGTG
GCCGGGCGTT CGATGCCGGC GCTGGTGGTC GCGATCCTGC TGATGTCGGA ATTCATCGGC
GCGAAATCGA CCGTCGGCAC GTCGCAGGAG GCGTTCTCGG CCGGCATCGC CGCGTCGTGG
TCGGTGCTCG CGGCCGCCAT CGGTTTCCTG CTCTTCGGCC TGTTCATGGC CCGGCGCCTG
TACGCATCCG GTGAATTCAC GATCTCCGGA TTCATCGCGC AGCGATACGG GCACGGTGCG
AAGCTCGCCG TTTCCGCGAT CATGATCTAT GCGCTGTTTG TCGTGAACGT CGGCAACTAC
GTGAGCGGCG CGGCGGCGAT CTCGACGGTC ATGCGCATCA ACCTGCCGAC GGCCGCCGTC
ATCACCGCGA TCGTCAGCAC GATCTATTTC GTGTGGGGCG GCCTCAAGAG CGTCGCATAC
CTGACGGTCG TGCACAGCGC CGTGAAGCTG CTCGGCATCG CCATTCTGGT CGGCGTCGCG
TGGAAGCTGT CGGGCGGTAT CGCGCCGATG GCACGGAGCC TGCCCGCGCA CTACTTCACG
TGGTCCGGTG CGCTGTCGGG CGGCACGATC GGCGCATGGA TCATCGGCAC GGCCGGGGCG
ATCTTCTCGA CGCAGTTCAT CATCCAGGCG ATCTCGGCCA CCCGCAGCCC CGAGGGGGCG
CGTGCATCGT CGCTGATCGC CGCGTTCCTG TGCGTGCCGA TCGCGCTCGC GCTCGGCTTC
ATCGGCGTGG CGGCCAAGTA CCTGTATCCC GGCGTCAAGA GCCTGTACGC GCTGCCCGTC
TTCCTGCAGC ACATGAATCC AATCCTGGCC GGCATCGTCA CGACGTCGCT CGTGGCATCG
ATCTTCGTCA GCGTATGCAC CGTCGCACTG GCGATCGCGT CGCTGATCGT GAAGGACTTC
TATGTGCCGC GTTTCAATCC GACGCCCGAC GTCGAACTGA GAATGACGCG CTGGATCTCG
CTGATCGTCG GCTTCCTGCC GCTGATCTTC GTGCTGTTCG TCCCGCAGAT CCTCGCGCTG
TCGTTCTTCA GTCGCGCGCT GCGGCTGTCC GTGTCGGTCG TCGCGCTGAT CGGCATCTAT
CTGCCGTTCT TCAGCGGCAA GCGCGGTGCC GTGTCGGCCC TCGTCGTCGC GACGCTCGCC
ACGACGTTCT GGTACCTGCT CGGCAACCCG TTCGGCATCG ACAACATGTA CGTCGCACTC
GTGACGCCGG CCATCGTGCT GGTGATCGGC AAGCTGCTGT TTCATGGCGA TGGCGCGAAC
CTTCGCGACA AGCCGCTCAC GCATCGCGAA TCGCACTGA
 
Protein sequence
MATFSYWDTA TIIGMVVAYI VVTSVVSIRL RSRNSEQFMV AGRSMPALVV AILLMSEFIG 
AKSTVGTSQE AFSAGIAASW SVLAAAIGFL LFGLFMARRL YASGEFTISG FIAQRYGHGA
KLAVSAIMIY ALFVVNVGNY VSGAAAISTV MRINLPTAAV ITAIVSTIYF VWGGLKSVAY
LTVVHSAVKL LGIAILVGVA WKLSGGIAPM ARSLPAHYFT WSGALSGGTI GAWIIGTAGA
IFSTQFIIQA ISATRSPEGA RASSLIAAFL CVPIALALGF IGVAAKYLYP GVKSLYALPV
FLQHMNPILA GIVTTSLVAS IFVSVCTVAL AIASLIVKDF YVPRFNPTPD VELRMTRWIS
LIVGFLPLIF VLFVPQILAL SFFSRALRLS VSVVALIGIY LPFFSGKRGA VSALVVATLA
TTFWYLLGNP FGIDNMYVAL VTPAIVLVIG KLLFHGDGAN LRDKPLTHRE SH