| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6904 |
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| Symbol | |
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| ID | 4454856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008545 |
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| Strand | - |
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| Start bp | 117268 |
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| End bp | 120054 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639698966 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_840526 |
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| Protein GI | 116687280 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACTCA AACCACCTGC GCTCGGGGAA CTCAAATTTC GCGAGCTGTA CGACGCGATT
CATCGGGGTT TGCTTCAGCG CAACCGCCTG CTGAAGCTGG ACACGCCGCT GGGACAGAAC
GCACTGATTC CGCTGCGTGC GCGTGGCACG GCCCGGATTG GCCGTGACTA TAACTGGACA
CTCGATGTCG CGTCGCTGCG TGACGACACC GCCCTGCTGT CGTTGATGCA CCAGCCAGTC
ACCCTATGGA TTCAGCAGGC CACTGCCCCG TTTGCCGATT CCGTCTATCG TCCAATCCAC
GGCTTCGTGC ACCGGGTCGG CTACCTGGGC GGGGACGGTG GGCTCTCAAC CTACCAGCTC
GAATTTTCGT CGGCGCTGGT GTTCCTGGGG GGCACGCGTA ATGACGAGGG GTGGCTCGAA
CAGACGGCGC AGGACATCGT ATCCGACCTC CTCAATCGCT ACCCGCAGTT GCAGGGCCGA
TTCCGCTTCA ACCTGAATCG CGAGCCGTCG GTGCGCTCGT GGTGCCGGCA AAGTGAAACC
GATCTTCATT TCTTTCACCG CCTGCTCGAA GACGAAGGCT GGTATTGCTA CTGGGCACAC
GAGCCGGTCC GGGACGGCGA GACACCCAAG ACCACGCTGG TTATTGTCGA CCAGGTCGCG
GCGCTCCCCG ATGCGAAGCC GGCCGATTTC GTGCACGGCG CTGGCGACAA CGAGGCCGTG
AACGGGTTCA CACACTGGGC GGCGATGCAG ACACTGCAGA GCATGCGGTA CGAGTCCAGC
TCGTTCGATT ACAAGCGCCC GTCTTCCCGC TTTGAAGCGG CGAGTGCGCT CGCGTCGGTC
AGTTACGTCA CGGACGACGG CCGGCACCAG GCGGAGCAAA ACCGGATTCC GAATGCGCCG
ATGACGGTCT ATGAGCCGAC CGCGTATGGC TATCCGGATT CTGACAGCGG CGGCGCCCGC
GCCCGCCGGC GCGTACAGGG CTGGGACGCA CGCGCCCGGC GCTACTTTGG GGTCGGCGGT
CTACGCTGGC TTGATGCGGG ATCGCGCTTC GTGCTCAACG ACCACCCGCG CCATCCGGAA
CGCGACGACG CCGTCCGAAC GTTCCTGGTG GTCGAGGCGC GCTGGTGTAT CGAGAACAAC
GTGCCAATCG GCCAGCCGCT GACCGAATTC CCGCTCAGCC TGCGTGCGGC GCTGGCCGAG
CAGCAGGCCG CACACGGCGC GCGCTTCTCG ACGCCGGGCC ACGCCGAGGA CGGTATGGCC
GGCTTCTTCG TGCTCGAGAT CGAGGCGCAG GACGCGCGGG TCGAGTTTCG CAGCCCGTTC
GACCATCCGA AACCGGCGAT GTCGATTGAG CATGCGCTCG TCGTTACGCA GCAGGGCATC
GAGGCCTGGT CGAACGAGAG GAACCAGGTC CGCGTGCATT TTGCGTGGGA CCGAAAAAAT
CCGGACGGCG CGTTCAATGC GTCGCCCCTG CTGTCGTCGA TGCAGTCCGA TACGGGCAAC
GGGTACGGCG CGGTGCACGT TCCGCGTGCG GGCGAATGGG TGCTCATCGG TTACTGGAGC
AATGACTGTG ATAAGCCGTT TATTTTGGGG CGTGTCAACG GCGGCACGAC ACCATCGCCA
TGGCACACGA ACGTGCTGCT TTCAGGGTTC CAGTCGCAGG GCTTCGGCAA CACCGGCGCG
TACAACGCGT TCGTGCACGA CGACGCGACG AACCAGGGCG GAACGCGGCT CATCAGCTAC
ACGGGCAAGA GCTACGCGGC GCTCACGCAG GGCTACCTGA TCCAGCAGGA CGGCAATACG
CGCGGTCGGT ACCTGGGCCA AGGGTTCGTA CTGCACGCCG ACGAATACGG TGCAGTGCGT
GCGAGCAAGG GCCTGTCGAT CAGCACGCAC TTGAAAGGAT ACGATGACGA ACAGCTCAGC
GTCGACGAAG CCCGCACGCG GCTGCAGCAG GCCGGAATGC TGGTGGAGTC GCTGTCGAGC
GCCAGCACGA CCGCGCAGGC CGAATCGCTA CAGGCGGGCC AGGATGCGCT GAAGGACCTG
GCGACAGCGG TACAAAAGCC GGCGTCAGGG CAGACGTCGG GCGGCGTCAC GGCCGGTGGC
GGCACCGGCA ACGCGAACAG CTTCGCGAAG CCCGTGATCG TGATCGCGAC CCCGGCGGAC
TTTGCTGCCC TCGCGGATCG TTCCGCGCAC GTTGTCGCGG AAGCGGAAAT CAACGTGGTC
AGCGGTGAGA ACACCCACCT GGCGAGCGGC AAGTCGCTTA TCGCGGCCGC TGCGGAGAAG
ATCAGCCTGT TCGTACAGAA GGCCGGAATG AAGCTGTTCG CTGCGAAGGG GCCGATCGAG
GTGTCCGCGC ACACCGACGA AATCAAACTG AACTCGGCCA AGGATACGTC GCTGTTCAGC
AAAAAGCGGA TCGTGATCGA GGCGACCGAG GAACTGATCT TCAAGTGCGG CGGCTCGTAC
ATCCGAGTCA CGAAGGATGG CATCGAGGAC GGCACGCGCG GCGGCCGCAC CATCAAATCA
GCATCGTTCA GCCGACAGGG ACCGAGCTCA GTCGCCGAGC ACATGAATAG CTTGCCGACG
GCCAAGTTCA ACGATCCGTA TGTCCTGCGC GATCGCATCA GCGGCGAGGT GCTGAAAAAC
CACCCGTACG AGCTGATTCG CGGCGATGGA ACAAAGTTGT CCGGGATGAC AAACGAGCTG
GGGCAAATCA CCGAGCAGAA GAGCGAGGAT ATCGAGAAGC TAGCGGTGCG CGCGTTGCGG
CCGACGCCGA CCGGTCCTGC AGCATGA
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| Protein sequence | MVLKPPALGE LKFRELYDAI HRGLLQRNRL LKLDTPLGQN ALIPLRARGT ARIGRDYNWT
LDVASLRDDT ALLSLMHQPV TLWIQQATAP FADSVYRPIH GFVHRVGYLG GDGGLSTYQL
EFSSALVFLG GTRNDEGWLE QTAQDIVSDL LNRYPQLQGR FRFNLNREPS VRSWCRQSET
DLHFFHRLLE DEGWYCYWAH EPVRDGETPK TTLVIVDQVA ALPDAKPADF VHGAGDNEAV
NGFTHWAAMQ TLQSMRYESS SFDYKRPSSR FEAASALASV SYVTDDGRHQ AEQNRIPNAP
MTVYEPTAYG YPDSDSGGAR ARRRVQGWDA RARRYFGVGG LRWLDAGSRF VLNDHPRHPE
RDDAVRTFLV VEARWCIENN VPIGQPLTEF PLSLRAALAE QQAAHGARFS TPGHAEDGMA
GFFVLEIEAQ DARVEFRSPF DHPKPAMSIE HALVVTQQGI EAWSNERNQV RVHFAWDRKN
PDGAFNASPL LSSMQSDTGN GYGAVHVPRA GEWVLIGYWS NDCDKPFILG RVNGGTTPSP
WHTNVLLSGF QSQGFGNTGA YNAFVHDDAT NQGGTRLISY TGKSYAALTQ GYLIQQDGNT
RGRYLGQGFV LHADEYGAVR ASKGLSISTH LKGYDDEQLS VDEARTRLQQ AGMLVESLSS
ASTTAQAESL QAGQDALKDL ATAVQKPASG QTSGGVTAGG GTGNANSFAK PVIVIATPAD
FAALADRSAH VVAEAEINVV SGENTHLASG KSLIAAAAEK ISLFVQKAGM KLFAAKGPIE
VSAHTDEIKL NSAKDTSLFS KKRIVIEATE ELIFKCGGSY IRVTKDGIED GTRGGRTIKS
ASFSRQGPSS VAEHMNSLPT AKFNDPYVLR DRISGEVLKN HPYELIRGDG TKLSGMTNEL
GQITEQKSED IEKLAVRALR PTPTGPAA
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